Gene Namu_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3543 
Symbol 
ID8449162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3891612 
End bp3892373 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content76% 
IMG OID645042621 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003202857 
Protein GI258653701 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000220763 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00713021 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGAGCGG ACACATCCCG GACCCCCCAG GCGAGCGGTC GCGGCGTCGA TCGGCTGCCG 
GACGGTCCCG ATCGGGACGA CGAGCTCGCC GCCCTGTACG CCTGGCCCAC CGCCACCCCG
CACGTGCGGG CCAACATGAT CACCTCGTTG GACGGCGGAG CCGCCCTCGA CGGGCGGTCA
GGGGGCCTGG GCAACGAGGC CGACCGCGAG CTGTTCGCGG TGTTGCGTGA CCTGGCCGAC
GTCATCCTGG TCGGCGCGGG CACCGTGCGG ACCGAGCAGT ACGGCGGCAT CCGGTTCGAC
CCGGACCGGC TCGCCCGCCG CCGGCGCTGG GGCCGATCCA AGCAGCCACC GCCGATCGCC
GTGGTCACCC GCCGCGGCCT GGACGCCGAC CTGCCGCTGT TCACCGACAC CCAGACCCGG
CCGATCGTGA TCACCCCGCA GGCCGCGGCC GAGCGGGTCC CGCCGACCGC CGACGCGCTG
ATCGCCGGGA CCGACGAGGT CGACCTGGCC GCCGCCGTGC GCGGGTTGGC CGACCGGGGC
CTGGGCCGGA TCCACTGCGA GGGCGGGCCG GCCCTGCTCG GCGACCTGAT CGCCCGCGAC
CTGCTCGACG AATGCTGCCT GACCATCGCG CCGGTCCTGC TCGGCTCGGC CGCGACCCGG
CTGCTGCCCA TCGACCTGGC CGCTCCGGTG GCCTGGACGC CGGCCCTGCT GCGGATCGGC
GGGGCGCACC TGTTCGCCCG TTACCTGCGC GAGCCGGCAT GA
 
Protein sequence
MRADTSRTPQ ASGRGVDRLP DGPDRDDELA ALYAWPTATP HVRANMITSL DGGAALDGRS 
GGLGNEADRE LFAVLRDLAD VILVGAGTVR TEQYGGIRFD PDRLARRRRW GRSKQPPPIA
VVTRRGLDAD LPLFTDTQTR PIVITPQAAA ERVPPTADAL IAGTDEVDLA AAVRGLADRG
LGRIHCEGGP ALLGDLIARD LLDECCLTIA PVLLGSAATR LLPIDLAAPV AWTPALLRIG
GAHLFARYLR EPA