| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3526 |
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| Symbol | |
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| ID | 8449145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3873280 |
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| End bp | 3875286 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645042604 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_003202840 |
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| Protein GI | 258653684 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000131402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.176407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGCG GCGGCCTGAT CGTGGTCGCC TTCGTCGTGC TCGCCATCAC CTACCCCCGG
GTGTCGCTGC TGACCCTGGT GGCGCTGGAC GTCTCCAACA TCAACGGGGT CATCGCCGAC
CAGCTGGGCA CCAGCCCGTA CAAGCCGCAG CTGGCGCTGG CCGTCGTCGT GGTGCTGGTG
ATGATGCGCC GCAGGATGTT CCGGTTCGCC TGGTCGCCGG TGCTGCTGGG GGCGATGGTG
CTGTTCGCCG GGTTCTGCGT GAGCTTCGTG GCCGCGGCCG ACCCGGTGAC CTCGCTGGAT
CTGCTGTCCT CCCAGGCCCG CGACCTGCTG TATTTCGTGG TCGTCTACGC CCTGGTGCTG
TCCACCGACC AGGTCAAACC GACCGCCGCG GTCGCCGTCC TGGTGCTGGC CGCGTTGGCC
GGGCTGACCG TGGTGCACGA GTTCGTGCTG CACAACCAGG GCAGCCTGGG CGGCCTGAGC
CGGGTGCCGC TGGTCCAGGA GGACGGGGCG CTGACCCCCC GGCACGCGGG CACGTCCTCG
GACGTGAATT TCTGGGGCCG GCTGCTGATC CTGTTCACGC CCATGTCGCT CTCGCTGCTG
GCCATGAGCA AGTCCTGGCG GGACCGCGTG CTGTGGGGTG GGGCGACCGT GTCGCTGATG
CTGGGGGTGT ACCTGACCCA GTCCCGCGGC GGCTTCATCG CGTTGTTCAT CGGCCTGGTG
ATGTGGGCCG TGCTGGCCGG CGGGGCCTAC CGAAAGGCGT TGCTGTACCT GCCGGTCGCG
CTGATCGTCA TCGTCCCGTT GACCGGGATC GGCAGCCGGC TGGGCACGCT GACCGCGGTC
GTCTCCGGCT CCACGACCAC CGCGGACCCG TCGGTGGTGA CCCGTAAGCG CTTTCAGCTC
GACGCCTGGC ACATGTTCCT GGACCGACCG ATCACCGGCC ACGGGATCGG CAGCTACGGC
GGGCTATTCG CGGAGTACGA CCGGCTGGCC AACTTCTATG AACCAGTCAA CATCGTCGTC
GCCGCGCACA ATTTCTACCT GGAGCAGGCC GCCGACGGCG GGGTGGTCCT GCTGATCTGC
TGGGCGTTCT TCTTCGGCAC GATCCTGTTC GTCGCCCTGC GCACCATGAT CGGGGCCGGA
CGAACCGGTG ACGACACCCG CCGGTTCCTG GCCCTGGGGG TGATCGGCGG GCTGATCGGC
TGGCTGATCG CCAGCGTCTT CCTGCACCTG TCGGACTTCC GGGCCCTGCT GCTGATCGCG
GTCATCGCCG CGGCCGTCGA CGTGCAAAGC CGGGCCGCGA TCGACCGTCG CGGGATCGCC
CCCGAGCCTG AGCCGGGCCC GTGGCGCCCC GGCCGCGGCG TGGTCGCCGG GCTCGCTGTG
ATGGCCGCGC TGAGCCTGCT GGGCACGGTC GCCGTCCTCA CCAATCGCAC GACGGTCTAC
ACCAGCACGA CCGCCCTGGG CATCGTGCCG TCGGGGGCGG TGAATCCGGC CAGTGCCTAC
TCGCTGGACC TCATCACCCG GGGGCTGATC GGCCCGACGT TCACCGAGGT GCTCAGCCGG
TCGGTCGACG CCACCGCGGT CACCCAGCGG GCCGGCCCCG GCGGCGCTGA CAGTGCTGAC
AGTGCTGACG GGGCTGACCG TGCGGATGTC GAGATCGCTT TCGCCCAGTC GCGACTGGGC
GGTGGGGTGG TGCTCACGGT CACCGCCGAC GACAGCGACG CGGCCACCGA ACTGACCGCC
GCGGCGGTCG CGGCGAGCAA GGCTCGGATC GCCGACCTGG ACACCGGCTA CCAGCTGATC
GGCGATCCCG CCCAGCCGCA ACCGGTCTCG TCGCCGGAGT GGTGGTGGCT GCCGGCGCTG
GCGTTGTCCA CGATCGGCTG TGCCGCGCTC GCCGTGATCA CCGGCCGGCG GCGCCGGGCC
CTTCGACCGG CCGACCCGGA CCGCGGGCCG GCCGGAACCG CCGATCGGGC CGAGCAGACC
CGCGTCCCGG CCCTGGCGGC CCGGTGA
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| Protein sequence | MAGGGLIVVA FVVLAITYPR VSLLTLVALD VSNINGVIAD QLGTSPYKPQ LALAVVVVLV
MMRRRMFRFA WSPVLLGAMV LFAGFCVSFV AAADPVTSLD LLSSQARDLL YFVVVYALVL
STDQVKPTAA VAVLVLAALA GLTVVHEFVL HNQGSLGGLS RVPLVQEDGA LTPRHAGTSS
DVNFWGRLLI LFTPMSLSLL AMSKSWRDRV LWGGATVSLM LGVYLTQSRG GFIALFIGLV
MWAVLAGGAY RKALLYLPVA LIVIVPLTGI GSRLGTLTAV VSGSTTTADP SVVTRKRFQL
DAWHMFLDRP ITGHGIGSYG GLFAEYDRLA NFYEPVNIVV AAHNFYLEQA ADGGVVLLIC
WAFFFGTILF VALRTMIGAG RTGDDTRRFL ALGVIGGLIG WLIASVFLHL SDFRALLLIA
VIAAAVDVQS RAAIDRRGIA PEPEPGPWRP GRGVVAGLAV MAALSLLGTV AVLTNRTTVY
TSTTALGIVP SGAVNPASAY SLDLITRGLI GPTFTEVLSR SVDATAVTQR AGPGGADSAD
SADGADRADV EIAFAQSRLG GGVVLTVTAD DSDAATELTA AAVAASKARI ADLDTGYQLI
GDPAQPQPVS SPEWWWLPAL ALSTIGCAAL AVITGRRRRA LRPADPDRGP AGTADRAEQT
RVPALAAR
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