Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3497 |
Symbol | |
ID | 8449116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3840542 |
End bp | 3841423 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645042575 |
Product | Integrase catalytic region |
Protein accession | YP_003202811 |
Protein GI | 258653655 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000045245 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0084988 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGCGA CCGGCGCCCC GATCAGGGTG CCGGTCGCGG TGACGTTGCG GGTGCTCGGC CTTTCGCGGG CCGGGTACTA CAAGTGGCTC AGCGACCCCG TATGCCAGCG GGACTACGAC GACGCCCACC TCATCGACAA GCTCTACGAC CTCCATGGCG ACGATGCGAC GTTGGGCTAC AGGTTCCTCA CCGACGAACT CGAAGACGAG CACGGCATCC AGGTCGGGGA GAACCGGGTG CACCGCCTGT GCCGCATCGC CGGCATCACT GCCAGCCACC ACAAGAAGCG CTCCAAGACC GGCTCGACCG GCCCCGCGCC ACACGACGAC CTCCTCGCGG TCGTCGACGA GCACGGCGTC GTACGTCACG AGTTCCTCGC CGACGCCCCG AACAAGGTGT GGCTGTGGGA CATTTCCGAG CACCCCACCC GCGAAGGCAA GCTCTACATC TGCGCGATCA AGGACGTGTG GTCGAACAAG ATCGTGGGCT ACTCCATCGA CTCCCGGATG AAGTCGTCCC TGGCGCGGGC CGCGATGCGC AACGCGATCG CGCTCCGCAG CCCGGCCGGG ACAGTCTGTC ACTCCGACCG AGGCGGTCAG TTTCGTGCCA AGCGGACCCA GCGGCTGCTG GCGAACAACG ACCTGGTGGG GTCGATGGGC CGCTCCCACG GCGCCGGCGA CAACGCCAGC ATGGAGAGCT TCTTTTCCCT GCTGCAGAAG AACGTCCTGA ACACCCGCCG TTGGGACACC CGCGACGACC TCCGCCTCGC GATCGTCACC TGGATCGAAA CCAAGTACAA CCGACGACGC CGCCAGCGGG CCCTCGGCAA GCTCACCCCG GTCGAGTTTG AGATGATCTA CAAGGCCGCA GAAGCGGCCT GA
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Protein sequence | MAATGAPIRV PVAVTLRVLG LSRAGYYKWL SDPVCQRDYD DAHLIDKLYD LHGDDATLGY RFLTDELEDE HGIQVGENRV HRLCRIAGIT ASHHKKRSKT GSTGPAPHDD LLAVVDEHGV VRHEFLADAP NKVWLWDISE HPTREGKLYI CAIKDVWSNK IVGYSIDSRM KSSLARAAMR NAIALRSPAG TVCHSDRGGQ FRAKRTQRLL ANNDLVGSMG RSHGAGDNAS MESFFSLLQK NVLNTRRWDT RDDLRLAIVT WIETKYNRRR RQRALGKLTP VEFEMIYKAA EAA
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