| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3481 |
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| Symbol | |
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| ID | 8449100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3827691 |
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| End bp | 3829994 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645042559 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003202795 |
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| Protein GI | 258653639 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3953] SLT domain proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0132558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0026224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGGCGT TCTTCACCGA CGTGTTGGTG CCGGCCGGTC AGCAGGCTTG GGCGTGGTTC
GAGGAGAACC TTCTCCCGAC GATCCAGCGG GTGGGCGAGT TCATCTCCAA CACCTTCGGG
AACCTGTTCA CGGTCCTGGG CGGGGTGATC GACTTCCTGG CGGGTGTGTT CACCGGCGAC
TGGTCCCGGG CCTGGGACGG GATCAAGACC ATCTTCTCGG GGATCTGGGA CCAGATCCAG
AACATCGTGT CGGCGGCCTG GGATGTCGTG ACCGGGATCG GCGGCAGGAT CCTGGACTGG
CTTGGTCAGC TCGCCCCGTG GGCGTGGGAG AAGATCTCCG CCTTCGGCAG CTTCCTGGTG
GAGAAGGGAG CGCAGTTCCT CCAGTGGATC TGGGACGGCA TCACCACCAA GGCCGTGGAG
GTCTGGACGT GGTTCACGGC CCTGCCAGGT TCGCTGTGGG AACAGGTGCA GGCCGGCGCC
GGGTGGTTGG TCGACCGAGG CAAGGACTTC ATCCAGTGGA TCTGGGACGG GATCACGGCC
AAGTTCGGCG AGGTCCAGCA GTGGTTCCTG AACCTGCCAT CGGCCCTGTG GGGGGCGATC
CAGGGCGCCT GGTCTACGGC CACGCAATGG GGCGGCCAAC TGATCAAGTA CATCATCGAC
GGGATCTCCG GATCTGATCC GTACATCGCC GCCGAGCTGT CGCGAACCCT GATCAAGGCA
GCGGAGGCTG TCGTGCCCGG GCTGGGCGGC CTGATCGACC TGACCGGCGT CGACGTGGAC
AAGAACATCA ACGACTACCT GTCGAGCCTG AGCTTCAGCC GCAACGCCGC GAACGCTGCG
CTCTCGGCCG GTCTAAGCCT GGTGCCGGGA CGGGCCACCG GTGGCCTGTT CGGTCCGTAC
GACGGACGTA CGGGGGGCCA GATCGCGGTC GGCACCCACG GCACCGCCGA CGACGTCCTG
ATCCGAGGAT CCCGCAACGA GTTCATGGTC AACGAGAAGG CCACCGCACA GAACCTGCCG
CTGCTGTGGC ACATCAACGC CGGCGGCAAC CCGGCGGACT TCTTCGGCCG GCTCCCCGGG
TTCGCCAACG GCGGCCTGAT CGGCAGCATG GGCATGCTGC TCGGTGCCTC TCTGGTCAAG
GCGATCCTGC CGAGCCTGAC CGAACGGGTG GCCGACAGCA CGGCCAACGC GGCAGCCGGC
AGTGCGTTCA TCGGGAACGG GCAGTGGGGT CCGGCCACCG ACGGATCCAG CCTCGCGGCG
AACACCGCGG CGGCCAAGGC GTTCATCACG CAGAAGTGGG GCATCACCGA CATCGGCGGG
GTCTACGGCG GCTCGGTGCC AGGATCCGAT CACCCCATCG GCAAGGCCCT GGACGTGATG
ATCGCGAACT ACCTGTCCGC GGCCGGCATC GCCCAAGGCA CCAGCGTCGC CGACTGGTTC
GTGGGCAACC CGAACGCCTT CGGTACCAAG TACGTGATCT GGCGGGATCG GATCAACCAG
GGCGGCTCGT GGGCCCCGTA TCAGCATCCG TCCGGCAGCA ACGACACCCT GCAACACCGG
GACCACGTCC ACCTGAGCTT CCTCACGGGC ACCGGGCAGT TCTCCGGCGG GGCACCGGTC
GCGGCCGACG ATAAGCCCAC GGGCCTCCTG GGTAGCTTGG CCTCGGCGCT GACCTCTGGG
TTCATGGCCA AGGTCGGCGG GATCACCCCC GTGACCGGCG GCAGCGGGGT CGAGCGTTGG
CGCAGCACCA TGCTCCGGGC GCTGGGCATC ACCGGTCAGC CGGCGTCCTA CGCCGACCGG
GGCCTGATGC AGATGGACTC AGAGTCCAGC GGCAACGAGC GGGCCGTGAA CACCTGGGAC
CGCAACTTCC CGCTGTACGG CGGGTCCAAG GGCCTGATGC AGGTCATCGA CCCGACGTTC
CGCCAGTACG CCATTGCGCC CTGGAACAAG GACATCTTCG ATCCGCTGTC CAACATCATA
GCCTCGATCC GGTACAGCCT GGCCACGTAC GGCAGCCTTG ACAAGGCGTG GCGTGGGGTG
GCGTATGACC AGGGTGGATG GCTTCAGCCG GGCGGGCAGG GTGTGAACCT GCTGAACAAG
CCGGAAGCTG TACTGACGCC GGCGCAGTCG GATGCGTACA TCACCCACGC GAAGGCTGTG
CAGGCTGGCT ACTCCGGGCA GGCACCGACG CTGGTCATCA ACCTGGATTC GTCGGATCCG
TTGCAGGTTG CTGTTGGTCA GATGATTGAG AACAGCCTCG AACGCGCCAC CGTCGAGCTT
GAGGAAGCGG GTATGCGTCG ATGA
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| Protein sequence | MAAFFTDVLV PAGQQAWAWF EENLLPTIQR VGEFISNTFG NLFTVLGGVI DFLAGVFTGD
WSRAWDGIKT IFSGIWDQIQ NIVSAAWDVV TGIGGRILDW LGQLAPWAWE KISAFGSFLV
EKGAQFLQWI WDGITTKAVE VWTWFTALPG SLWEQVQAGA GWLVDRGKDF IQWIWDGITA
KFGEVQQWFL NLPSALWGAI QGAWSTATQW GGQLIKYIID GISGSDPYIA AELSRTLIKA
AEAVVPGLGG LIDLTGVDVD KNINDYLSSL SFSRNAANAA LSAGLSLVPG RATGGLFGPY
DGRTGGQIAV GTHGTADDVL IRGSRNEFMV NEKATAQNLP LLWHINAGGN PADFFGRLPG
FANGGLIGSM GMLLGASLVK AILPSLTERV ADSTANAAAG SAFIGNGQWG PATDGSSLAA
NTAAAKAFIT QKWGITDIGG VYGGSVPGSD HPIGKALDVM IANYLSAAGI AQGTSVADWF
VGNPNAFGTK YVIWRDRINQ GGSWAPYQHP SGSNDTLQHR DHVHLSFLTG TGQFSGGAPV
AADDKPTGLL GSLASALTSG FMAKVGGITP VTGGSGVERW RSTMLRALGI TGQPASYADR
GLMQMDSESS GNERAVNTWD RNFPLYGGSK GLMQVIDPTF RQYAIAPWNK DIFDPLSNII
ASIRYSLATY GSLDKAWRGV AYDQGGWLQP GGQGVNLLNK PEAVLTPAQS DAYITHAKAV
QAGYSGQAPT LVINLDSSDP LQVAVGQMIE NSLERATVEL EEAGMRR
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