| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3472 |
|---|
| Symbol | |
|---|
| ID | 8449087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3820811 |
|---|
| End bp | 3822199 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645042546 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_003202786 |
|---|
| Protein GI | 258653630 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00565212 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00216931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA CCGAGCAGTC CTCATCGGTG CCGTCGTCGC CGGTCGATGA TGAGGTGCCG
GGTCCGGCCC GGTCGACTGG TCGGCAGCTG CGGGAGTTGC TGGCCGACGA CGTGTGGCTG
GATGAGTTGA TCGACCGCGC CGAGGCCGGC GGGGTCAGGT TGACCGGCGA GGGCGGGTTC
TTGCCGGAGA TGATCAAGGC TGTGCTCGAA CGAGGCCTGG CCGCGGAATT GACCGGGCAC
CTGGGCTACG AAGCGGGCGA CCCGGCTGGT CGGGGCTCGC CGAACAGTCG GAACGGGCAC
ACCCCGAAAA CGCTCTCGAC CGAGGTCGGT CCGGTTCCGT TGAGCGTGCC GCGGGACCGC
AAGTCGACGT TCGAGCCGCG GCTGGTGCCC AAGGGCCAAC GCCGCCTGGG CGGGTTGGAC
GAGCAGATCA TCAGCCTCTA CGCCGGCGGC ATGACCGTCC GCGATATCCA GGCCCATCTG
GCCCGGACAC TGGGCACCGA GCTGTCCCAC GACACGATCA GCAAGATCAC CGACGCGGTC
CTGGAAGAGG TCAAGGCCTG GCAGTCCCGG CCGTTGGAAG AGCTCTACCC GATCATGTAC
CTGGACGCGA TCGTGGTGAA GGTCCGCGAC GGGCACCAGG TTCGGAACAA GAGCGCGTAC
ATCGCCGTCG GCGTCGATAT GGCCGGGATC AAGCACGTGC TGGGGATCTG GGTGCAGTCC
ACCGAGGGCG CCAAGTTCTG GGCCGGGGTC TGCGCCGAGC TGGCCAACCG GGGCGTCAAG
GACGTGCTGA TCGTGTGTTG CGACGGGCTG ACCGGGCTAC CCGAGGCGAT CGAGGCGACC
TGGCCGCGGA CGACCGTCCA AACGTGTGTG GTCCACCTGA TCCGGGCCTC GATGCGGTTC
GTGTCCTACA CCGACCGGCG GGCTGTCGTG GCCCAGCTCA AGACGATCTA CACCGCCCCG
ACCGTGGACG CCGCCGAGAC GGCGCTGTTG ACGTTCGCCG AGACCGATCT GGCCCGCCGC
TACCCGGCCT GCCTGCGGAC CTGGCAGGAC GCCTGGGACC GGTTCATCCC GTTCCTGGCG
TTCCCATGGC CGGTCCGCAA GATCATCTAC ACCACGAACG CGATCGAGTC GTTGAACTAC
CAGCTCCGCA AGATCATCAA GAACCGCGGG CACTTCCCCA ACGACGACGC AGTGGTCAAG
CTGCTGTGGC TGGCCATCCG CGATATCGAG GACAAACGCG CCCGGGACCG GGCCGCGGAG
AAGGGCAAAC GAGTCGGACG CACCGCCGAG GGCCGGCTCG TCGAGGGCCA GGTCACCACC
GGTTGGAAAC CCGCGCTCGG TGCACTGGCC ATCCAATACC CCGACCGCAT CACCCCCAGG
ATCAGCTGA
|
|---|
| Protein sequence | MTMTEQSSSV PSSPVDDEVP GPARSTGRQL RELLADDVWL DELIDRAEAG GVRLTGEGGF
LPEMIKAVLE RGLAAELTGH LGYEAGDPAG RGSPNSRNGH TPKTLSTEVG PVPLSVPRDR
KSTFEPRLVP KGQRRLGGLD EQIISLYAGG MTVRDIQAHL ARTLGTELSH DTISKITDAV
LEEVKAWQSR PLEELYPIMY LDAIVVKVRD GHQVRNKSAY IAVGVDMAGI KHVLGIWVQS
TEGAKFWAGV CAELANRGVK DVLIVCCDGL TGLPEAIEAT WPRTTVQTCV VHLIRASMRF
VSYTDRRAVV AQLKTIYTAP TVDAAETALL TFAETDLARR YPACLRTWQD AWDRFIPFLA
FPWPVRKIIY TTNAIESLNY QLRKIIKNRG HFPNDDAVVK LLWLAIRDIE DKRARDRAAE
KGKRVGRTAE GRLVEGQVTT GWKPALGALA IQYPDRITPR IS
|
|---|
| |