Gene Namu_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3452 
Symbol 
ID8449067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3795035 
End bp3795718 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content76% 
IMG OID645042528 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003202768 
Protein GI258653612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000897017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00397123 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTCCG CACCGCTGAC CGCCCGGGCC GTGGCCCGCC GCGAGCTGAC CCAGGCCATC 
GTCGACGGCG CCCGGGGGCA GCTCGCGCAG GTCGGACCGG CTCAGCTGTC GGTGCGCGCG
GTGGCCCGCG AGCTGGGCAT GGCCTCCTCG GCCGTCTACC GCTATTTCCC CAGCCGGGAC
GAGCTGCTGA CCGAGCTGCT GGTGGTGATC TACGGCGAGC TGGCCGACCG GCTGACGGCG
GCCGACGCCG CCGTGGACCG CGCCGACCTG TCCGGACGCT GGCGCACGCT GGCCCGCACG
CTGCGATCCT GGGCCCGGGC CGCGCCGCAC GAGTACGGGC TGCTCTACGG CTCACCGGTC
CCCGGGTACG CCGCCCCGCA GGCCACCGTC GCCCCGGCCG CCCGGGTCAC CCTGGTGCTG
CTCACCCTGA TGCGGGTCAC CGACGTGCAC GGACCGCTGA CCCCGCGGCG GCCGCTGCCG
GCGGGCACCC ACGAGCAGCT GGCCGACTTC CGGGCGGCCG CGGGGCTGGA GCTCTCCGAC
GAGGCGACCC TGCGCGGCCT GACCGCGTGG GGCGGCCTGC TCGGCGCGCT CACGCTGGAG
CTGTTCGGCC ACCTGCACCG GGCGGTCACC GACTACGACG CCCACTTCGA GCTGATCATC
GATCGACTCG ACCCGACCGT CTGA
 
Protein sequence
MTSAPLTARA VARRELTQAI VDGARGQLAQ VGPAQLSVRA VARELGMASS AVYRYFPSRD 
ELLTELLVVI YGELADRLTA ADAAVDRADL SGRWRTLART LRSWARAAPH EYGLLYGSPV
PGYAAPQATV APAARVTLVL LTLMRVTDVH GPLTPRRPLP AGTHEQLADF RAAAGLELSD
EATLRGLTAW GGLLGALTLE LFGHLHRAVT DYDAHFELII DRLDPTV