Gene Namu_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3450 
Symbol 
ID8449065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3793326 
End bp3793796 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content70% 
IMG OID645042526 
Productmethylglyoxal synthase 
Protein accessionYP_003202766 
Protein GI258653610 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1803] Methylglyoxal synthase 
TIGRFAM ID[TIGR00160] methylglyoxal synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000281554 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00361328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGTCA TCACCACCCC GATCGTGCGA CGGATCGCCA TGGTCGCCCA CGACAACAAG 
AAGGTCGACC TGCTGCGCTG GGCCGAGTTC AACCGGCTCA CCCTGGCCCG GCACGAGCTG
TTCGCCACCG GGACCACCGG CACGCTGCTG GAGTACGAGC TGGGCCTGCG GGTGCACCGG
TACCTGTCCG GCCCGCTCGG CGGCGACCAG CAGATCGGCG CCAAGATCGC CGAGGGGCAG
ATCGACATGC TGATCTTCTT CTGGGACCCG CTCGAGCCGC AGCCGCACGA TCCCGACGTC
AAGGCGCTGC TCCGGCTGGC CGCCCTGTGG AACATCCCGG TCGCCACCAA CACGGCCACC
GCGGACATGT TGATCTCCTC CCCGCTGCTG GGCGGCGACT ACCGGCCCGT CCGGCCCGAC
CTGGACCGGC CGGCCACCGG CGACTCGCCC CTGGTCGCGG CCCTGCACTG A
 
Protein sequence
MSVITTPIVR RIAMVAHDNK KVDLLRWAEF NRLTLARHEL FATGTTGTLL EYELGLRVHR 
YLSGPLGGDQ QIGAKIAEGQ IDMLIFFWDP LEPQPHDPDV KALLRLAALW NIPVATNTAT
ADMLISSPLL GGDYRPVRPD LDRPATGDSP LVAALH