Gene Namu_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3443 
Symbol 
ID8449058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3785736 
End bp3787070 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content74% 
IMG OID645042519 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_003202759 
Protein GI258653603 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000406653 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000176251 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGACC ACTCGCCCAG CCGTTCGACC CCCGCCCAGC GGTGGCAGGC CCGGGGGGCC 
TTCGCCGCCT GGATCGCCGC GCTGATCGTG CTCATCGCCA CCGAGGGCGC GATCGGGCTG
ACCCTGCTGG TGATCGGGCT GCTCGGCTCG CTGCTGGTGA TCGTCGGCGG GTACCTGTTC
CTGGCCCGGC GCGGCCTGCT GCGCGGGCTG GGCATGTTCC TGGCCATGGC CACGGTCGTC
GCCGTGCTGG TCGTCTTCAT CCGGCAGAAC GCGATTGTCG TCGCGCTCAT CGCCATCGCC
CTGCTGGTCG TCGGCGGCGC GGCCGCCCAC GCGGCCCTGC GCACCCGGAT CCCGCCGTGG
ATGCCGAGCG TGCGCACCCC GCCGCCGCGC CGGCCGTTCA TCGTGATGAA CCCGCGCTCG
GGCGGTGGCA AGGTCGTCAA GTTCGACCTC CAGCGCAAGG CGCAGGCGAT GGGCGCCGAG
GTGGTGCTGC TGGAGGGGCC GGGTCACGTG GACGTCGCCG CGATCGTGCG CGACGCCGTC
GACCGGGGCG CCGACCTGCT CGGCGTCGCC GGCGGTGACG GCACCCAGGC GCTGGTCGCC
GGGATCTGCG CCGAGCATGA CGTCCCGCTG CTGGTGATCA GTGCCGGCAC CCGCAACCAC
TTCGCGCTCG ACCTGGGCCT GGACCGGGAC GACCCGTCGA CGTGCCTGGC CGCGCTGACC
GACGGCGAGG AGGTCAAGGT CGACCTGGGC ATGATCGCCG ACCGGCCGTT CGTCAACAAC
GCATCCTTCG GCGCCTACGC GCAGATCGTG CAGAGCCCCG AGTACCGCGA CAACAAGAAC
CGCACCATCC TGGCCATGCT GCCGGACCTG CTCGATCCCA CCCAGGGCAG CCGGCTGACC
GTCCGGACCG GCGCGCGGAC GATCACCGAC CAGCAGGCCG TGCTGGTCAG CAACAACCCC
TACGGTTCGG GCCGGCTGCG CGACCTGGGC CGGCGGGAGC GGATCGACCA GGGCGAGCTC
GGCGTGGTCG CCGGGCACGT GGCCAGTGCC GCCGAGGCCG CGGCCCTGCT GCGCCGGTCG
CAGTACCGCA CGGTCACCAC GCTCGTCGGT GACGGCGACG TGGTCATCGA CGTCGACCGT
TCGGACGGGA CGCCGGCGGT CGCGGAGATC CCGGTGGGGG TGGACGGCGA GGCGCTGACC
GTGCCCGCCC CGGTCCGGTG CTCGATCCGG CCCAAGGCCC TGCGGGTGCG GATCCCGCGG
GTTCGGCCCG GGGTGCCGGT CTCGCCGGAG CCGATCGACT GGCAGCGGCT GGTCGCGCTG
GCGCTGGGCC GGTAG
 
Protein sequence
MPDHSPSRST PAQRWQARGA FAAWIAALIV LIATEGAIGL TLLVIGLLGS LLVIVGGYLF 
LARRGLLRGL GMFLAMATVV AVLVVFIRQN AIVVALIAIA LLVVGGAAAH AALRTRIPPW
MPSVRTPPPR RPFIVMNPRS GGGKVVKFDL QRKAQAMGAE VVLLEGPGHV DVAAIVRDAV
DRGADLLGVA GGDGTQALVA GICAEHDVPL LVISAGTRNH FALDLGLDRD DPSTCLAALT
DGEEVKVDLG MIADRPFVNN ASFGAYAQIV QSPEYRDNKN RTILAMLPDL LDPTQGSRLT
VRTGARTITD QQAVLVSNNP YGSGRLRDLG RRERIDQGEL GVVAGHVASA AEAAALLRRS
QYRTVTTLVG DGDVVIDVDR SDGTPAVAEI PVGVDGEALT VPAPVRCSIR PKALRVRIPR
VRPGVPVSPE PIDWQRLVAL ALGR