| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3429 |
|---|
| Symbol | |
|---|
| ID | 8449044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3769448 |
|---|
| End bp | 3770479 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645042505 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003202745 |
|---|
| Protein GI | 258653589 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00479151 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000975841 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAACC CGGTCACCCA ACAGCCGCCC GGCAGCAGCC TGGGCACCCC TTCGCCGGCC
GCGACCAGAC ACCGCCGGTT CGAGCTACGC AGCCTGGGCG AGGTCGGCGC CCTGGTCGTC
CTGATCGTCG TGTTCGCCGC GCTGAACCCC AGCACGTTCC TGACTATCGA CAACGTCCGC
ACGATCCTGG ATCAGTCGGC GACCCCGCTG ATCGTCGGCG TCGGCGCCAC CCTGGTCATC
CTGATGGGAT CGATCGACCT GTCGGTGGAA GGCCTGATGG GGGCCGGCGG CATGGCCTTC
ATCCTGGCCA CCGAGAACAG CCGCGGCTCC ACCGATCTGG GCGCCGCCGC GTTCGTGATC
GGCATCCTGG TCGGCGCGCT GCTGGGCATG CTGGCCGGCC TGATCCACAC CCGGCTCAAG
GTGCCCACGT TCATCGTGAC CATCGGTTTC TGGTTCATCG GGCTGGGCAT CGCCACCGTG
CTCTTCGGCA CCGACAGCAT CCCGCTGCTG CCCGACGGCG GCCTCAAGAC CTGGCCCAAC
ACCGTCTTCC TGGGCCTGCC GTTCTCGTTC TGGCTCGCGG GGCTGATCGT CGCGCTCGGC
TGGGTGATCA CCCGCTACAC CAAGTTGGGC CGGTTCACCT ACGCCATCGG CAACAACGAG
GAAGTCGCCC GCAGCAACGG GGTCTCGGTG AGCCGGATCA AGGTGTTCGT GTTCGCCTTC
GCCGGTGCCT GCAGCGGCCT GGCCGGCATC CTGGCCACCC TGCGGCTGGG CGCCGGCTCC
CCCACCGTCG GCGGCGGCAT CCTGTTCGTC ACCGTGGCCG CGGTCGTCAT CGGCGGCACC
TCGCTGTCCG GCGGCAAGGG CGGCGTCCTG CGCACCATGC TCGGCGTGAT GATCCTGACC
GTGCTCAACA ACGGGCTGAT CCTGAGCGGG GTCAGCTCCA GCATCCAGTC CGGCGTCTCC
GGCGCCATCC TGATCGTGGC CATCATCGTG GCGGCCTGGC CGCTGCGCAG TCGTCTGAGG
ATCACGAAAT GA
|
|---|
| Protein sequence | MANPVTQQPP GSSLGTPSPA ATRHRRFELR SLGEVGALVV LIVVFAALNP STFLTIDNVR
TILDQSATPL IVGVGATLVI LMGSIDLSVE GLMGAGGMAF ILATENSRGS TDLGAAAFVI
GILVGALLGM LAGLIHTRLK VPTFIVTIGF WFIGLGIATV LFGTDSIPLL PDGGLKTWPN
TVFLGLPFSF WLAGLIVALG WVITRYTKLG RFTYAIGNNE EVARSNGVSV SRIKVFVFAF
AGACSGLAGI LATLRLGAGS PTVGGGILFV TVAAVVIGGT SLSGGKGGVL RTMLGVMILT
VLNNGLILSG VSSSIQSGVS GAILIVAIIV AAWPLRSRLR ITK
|
|---|
| |