| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3428 |
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| Symbol | |
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| ID | 8449043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3768165 |
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| End bp | 3769298 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645042504 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003202744 |
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| Protein GI | 258653588 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00746761 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000105285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAGAA AGCGCAAGAC CAAGGTCCTG GCCGCCTTGG TCGCCGCCGC CGCCATCGCG
CTGAGCGGCT GCACCTCCAC CGCCGCCGGC GGTGGGTCCG GCAGCCAGGA GGCGATCGAC
CCGAACAACC TGGTTCTGGT CGCCTCGGTC ATCAACACCA CCAACCCCTA CATGGCCTCG
ATGATCGAGG GCGCCCAGGC GCTGGGCAAG AAGCTCGGCG TCGAGGTCCA GATCGTCGAC
TCCGCCGGCA GCAGCCAGAC CGAGATCTCC AAGATCCAGG CCATTCTCGC CCAGGGCAAG
AAGGTCGCGC TGATGGTGAA CACGGTCGCC AGCTCGGACG CCCCGACCAT CGTCGATGCG
GTCAAGCAGG CCGGCGGCTA CGTGGTGGTC TGGTGGAACA AGCCGGACAA CCTCGAGCCG
TGGGACGTCG GCAACAACTT CGTCGCCTTC CAGAAGTACT CCGGCGTCGA GAGCGGGGAG
TGCACGGGCA AGGCGTTGGC CGAAAGTCTC GGCGGCAAGG GCAATGTCAT CGGTCTGGCG
GGCGTCGAGG ACAGCACCAC CTCGCAGACC CGGGTGGCCG GCTTCAAGGA GGCCCTCAAG
GCCTACCCGG ACATCAAGCT GCTGGACGTG CAGTCGGCCA ACTGGGATCC GCAGCAGGGA
CTCTCGGTCA CCCAGAGCCT GCTGACCAAG TACCCGGACC AGGTCGACGG CATCTGGGCG
GCGGACGACG CCATGATCAT CGGCGCCACC AACGCGGCCA AGAACGCCGG CCAGTACAAC
GACATCAAGT TCGTCTCGGA CGGGCTGTAC CCGCCGGTGG TGGACATGAT GAAGGAGCCG
AACTCCCCGG TCGTGGGTGA GACCTTCCAC CGCGGCTTCA TGGCCTCCTC CATCGGCCTG
TACACCGCCT ACCTGGCTGC CACCGGGAAG ATCGACCCGT CGACGCTGCC GCAGGAGAAG
CGGGACAGCC TGTTCAAGCT GCAGTGCGTC GGCCCGAACG ATTTCGAGCA GTACACCAAG
TGGGACAACG ACGTCGACGG CTGGGTGAGC CAGCTGGTGG ACGGCGGCGA CCCGTGGAAC
GTGCAGCCCA CCCCGCTGGT CGGCCAGGGC CCGGAGCAGC TGCCCGCCGG CTGA
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| Protein sequence | MIRKRKTKVL AALVAAAAIA LSGCTSTAAG GGSGSQEAID PNNLVLVASV INTTNPYMAS
MIEGAQALGK KLGVEVQIVD SAGSSQTEIS KIQAILAQGK KVALMVNTVA SSDAPTIVDA
VKQAGGYVVV WWNKPDNLEP WDVGNNFVAF QKYSGVESGE CTGKALAESL GGKGNVIGLA
GVEDSTTSQT RVAGFKEALK AYPDIKLLDV QSANWDPQQG LSVTQSLLTK YPDQVDGIWA
ADDAMIIGAT NAAKNAGQYN DIKFVSDGLY PPVVDMMKEP NSPVVGETFH RGFMASSIGL
YTAYLAATGK IDPSTLPQEK RDSLFKLQCV GPNDFEQYTK WDNDVDGWVS QLVDGGDPWN
VQPTPLVGQG PEQLPAG
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