| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3424 |
|---|
| Symbol | |
|---|
| ID | 8449039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3763355 |
|---|
| End bp | 3764671 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645042500 |
|---|
| Product | carbohydrate kinase FGGY |
|---|
| Protein accession | YP_003202740 |
|---|
| Protein GI | 258653584 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000031899 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000118115 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGATTCCC GGCGCCTGGT GGCCATCTCG ATCACCCACC AGCGGGAGAC GTTCGCCTGC
CTGACCGAGG ACGGCCATTC GCTGCGCCCG GCCATGCTCT GGCTGGACAC CCGCGCCGTG
GCCGAGGTGG CCGAGTTCGG CACTCCGGAG GTCCATGAGA TCACCGGCAA GCCGCCGAAC
CCGACGCCCG CCTGGTACAA GCTGCTCTGG CTCAAGGAGC ACGAGCCGGA CACCCTGGTG
CGGACCGGCC GGATCGCCGA CGTGCAGGCC TACCTGGTGC ACCAGCTCAC CGGCAGCTGG
CACACCAGCT GGGCCAGCGC CGATCCGCTC GGCCTGGTCG ACATGCGGAC CTTCGACTAC
AGCGACGATC TGGTCAAGCA GGCCGGCCTG CAACCCAGCC AGCTGCCCAC CCTGTTCGCC
CCCGGCGCGG TGCTCGGCCA CATCCGGGCC GACGTCGCCG CCGACCTGAA CCTGCCGCCC
GATCTGCCGG TGGTGGCCGG CGTCGGCGAC GGCCAGTCCG CCGGCCTGGG CTGCGGGGTG
GTCCGGCCCG GCACCGCCTA CCTGAACCTG GGCACCGGCA TGATCTCGGG CAGTTACAGC
GACGAGTACT CGTTCGCCAA GGAGTTCCGG GTGCTGGCCG GGGCGATCCC CCGCTCGTAC
GCGTTCGAGA CCTTCATCGG CGGCGGCACC TACAACATCA GCTGGTTCGT GGAGAAGTTC
GCCGGCGTCG ACTCCCGCGC GCTGGGCCTG GACCTGACCG CCGAACAAAT CCTGGAGACG
GCGGCGGCGC AGATCCCGCC GGGCGCGGAG GGGCTGCTCT GCCTGCCCTA CTGGGCCGGC
GCGCTCACCC CGTACTGGGA CCCGCACGCC CGCGGCTCGC TGGTCGGGCT GACCGGCCGG
CACGGCAAAT CCCACGTCTA CCGGGCGATT CTGGAGGGCC TGGCCTTCGA GCAGCGACTG
CTCACCGACG GCCAGGCGCG GGTGCTCGGC GAGCCGATCA CCGACATCAT CGCCCTGGGC
GGCGGGTCCC GCAGCGCGCT GTGGTGCTCG ATCCTGGCCG ACGTGCTGCA ACGACCGGTG
CGGTTGGCCG GCGAGGCCGA GAGCACCTGC CTGGGCTCGG GCATGCTGGC CGCCGCCGCC
GTCGGCCTGC AGCCGGGCAT TCGCCAGGCC GGCGAGTCGA TGAGCTCGAC CACCCGGGTC
TACGAGCCCG ACGACGCCCG GCGCACCACC TACGACGGGC TGTACCGCAC CTACCGGCAG
CTCTACCCCC GACTGCGTGA GGTGTTCCAC GAGCTCAGCA CGGCCGGTGC GCCGTGA
|
|---|
| Protein sequence | MDSRRLVAIS ITHQRETFAC LTEDGHSLRP AMLWLDTRAV AEVAEFGTPE VHEITGKPPN
PTPAWYKLLW LKEHEPDTLV RTGRIADVQA YLVHQLTGSW HTSWASADPL GLVDMRTFDY
SDDLVKQAGL QPSQLPTLFA PGAVLGHIRA DVAADLNLPP DLPVVAGVGD GQSAGLGCGV
VRPGTAYLNL GTGMISGSYS DEYSFAKEFR VLAGAIPRSY AFETFIGGGT YNISWFVEKF
AGVDSRALGL DLTAEQILET AAAQIPPGAE GLLCLPYWAG ALTPYWDPHA RGSLVGLTGR
HGKSHVYRAI LEGLAFEQRL LTDGQARVLG EPITDIIALG GGSRSALWCS ILADVLQRPV
RLAGEAESTC LGSGMLAAAA VGLQPGIRQA GESMSSTTRV YEPDDARRTT YDGLYRTYRQ
LYPRLREVFH ELSTAGAP
|
|---|
| |