Gene Namu_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3420 
Symbol 
ID8449035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3759442 
End bp3760086 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID645042497 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_003202737 
Protein GI258653581 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000051614 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000918483 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAACT CCCTGGCGCG GTCCTCGGTG TCCAAGGTGA TGGACCCGAT CGGGCGCGGG 
CTGCTCAAGG CCGGCCTCAG TCCGGACCTG GTCACCGTCG TCGGCACGGC CGGCGTGGTG
GCCGGCTCGG TCGGCCTGCT GGCCACCGGG TACCTGTTCG CCGGCACCAT GGTCGTCACC
TTCTTCGTGC TGTGCGATCT GGTCGACGGG GCGATGGCCC GGGCCCGGGG CTACGGCACC
GACTTCGGGG TCGTGCTCGA CGCGTCCTGC GACCGCATCG CCGACGGCGC CCTGTTCGGC
GCCCTGGCCT ACTACGCCTT TGCCACCGAC CAGCGGCTGC TGGGCATCGC CGCGCTGATC
TGCCTGGTTG CCGGGCAGGT CATCTCCTAC GTCAAGGCCC GGGCGGACAG CGTCGCGCTG
GCCATCGGCG GCGCCCTGGC CGAGCGGGCC GAACGCAACG TGCTCGGCCT GGTCGGTGCC
GGGCTGGCCG GGCTCGGCGT GCCCTACGCA TTGGACGTGG CCCTGTGGCT GCTGGCCGTC
GCCGGGCTGG TCACGGTCGT GCAGCGGCTG GTCCAGGTCC GGCGGGCCGC GGTCAAGGCG
GCCGCCGAGC CGGGGCACCG CAGCACCGGG CGTCCCGCGC TGTGA
 
Protein sequence
MLNSLARSSV SKVMDPIGRG LLKAGLSPDL VTVVGTAGVV AGSVGLLATG YLFAGTMVVT 
FFVLCDLVDG AMARARGYGT DFGVVLDASC DRIADGALFG ALAYYAFATD QRLLGIAALI
CLVAGQVISY VKARADSVAL AIGGALAERA ERNVLGLVGA GLAGLGVPYA LDVALWLLAV
AGLVTVVQRL VQVRRAAVKA AAEPGHRSTG RPAL