| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3410 |
|---|
| Symbol | |
|---|
| ID | 8449025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3749186 |
|---|
| End bp | 3750091 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645042487 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202727 |
|---|
| Protein GI | 258653571 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00153814 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000113604 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGT CGGTAACGCC GACGCGCGCC CCGGCGGGCC GGGCGGTCGG CATCGGGCGG
ACCGTGCTGG TGGTCGGCGC GCTCACCCTG CAGGAGGCGG CCCGCCGCCG GGTGCTGCGG
GCACTGGCCG TGCTGACCGT CGTGCTGCTG GGCCTGAGCG CCTGGGGCTT CGCCAAACTG
GCCGGGTTCG AGTCGGACAC CGGCGAGCTG ACCAGCGGGG AAGCTCGGCT GGTCGCGTCC
CAGTTGCTGA ACCTGGTCAT GTTCGGCCTG AGCATGATCG CCGCGCTGGG CACCGCGTTC
CTGGCCGGCC CGACCCTGGC CGGCGAGATC GAGTCGGGGA TGGCGCTGGC GGTGCTGGCC
CGGCCGGTCC GCCGGTTCGC CGTGCTGCTG GGCAAGTGGG CCGGGCTGGT GGTGTTCGGC
TCCGGGTTCG TGGCCGTGGC CGGGCTGGCC CAGTTCGTCA TCGTGTGGGT GACGGTCGGG
TACTGGCCGC CGCAACCGGT GCTCGGGCTG GCCCTGCTGG CCGCCCAGAC CACCGTCCTG
CTGACGCTGG GACTGCTGCT GTCCACGCTC ATCTCGCCGA TGGCGTCGGG CATCGTGGCG
GTCGGGTTGT TCGGGGCGGC CTGGATCGCC GGGGTGGTCG GGGGAGTGGG GGCGGCGCTG
GGCAACGAGG GCGTCGCCCG GGTCGGCACC GTCGCCCAGG TGCTGCTGCC GACCGACGGG
CTCTGGCGCG GGGCCATGCA CGCGTTCCAG GACCCGGGCG TGCTGGCCCA GCTCGGGCGC
GCGTTCGAGG GCTTCCCGTT CCTGAGTCCG GCCGGGCTCT CGTCGCTGTA CCTGACCTGG
ACGCTGGTGT GGGTGCTGGC GATCCTGGGA TTGGCCGGCC TGGCCTTCGG GCGCCGCGAT
CTGTGA
|
|---|
| Protein sequence | MSGSVTPTRA PAGRAVGIGR TVLVVGALTL QEAARRRVLR ALAVLTVVLL GLSAWGFAKL
AGFESDTGEL TSGEARLVAS QLLNLVMFGL SMIAALGTAF LAGPTLAGEI ESGMALAVLA
RPVRRFAVLL GKWAGLVVFG SGFVAVAGLA QFVIVWVTVG YWPPQPVLGL ALLAAQTTVL
LTLGLLLSTL ISPMASGIVA VGLFGAAWIA GVVGGVGAAL GNEGVARVGT VAQVLLPTDG
LWRGAMHAFQ DPGVLAQLGR AFEGFPFLSP AGLSSLYLTW TLVWVLAILG LAGLAFGRRD
L
|
|---|
| |