| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3390 |
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| Symbol | |
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| ID | 8449005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3727967 |
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| End bp | 3729265 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645042467 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_003202707 |
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| Protein GI | 258653551 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000120226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000235272 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGTCG ACGACGGCCT GGACACGCCC GCCGCGGTCA GCGCGGCCGC GACCGGCGAC
AAGCTCTACG GCCGGCAGGC CGGGTTCCTG AGCCGGCTGT CCACCGGCAC CGGCGCCTTC
AACATCCTGG GCCGGCGCAA GGTCTACTAC ATCGTCTCCT CGGCGCTGGT GGTCGCCTCG
ATCCTGCTGA TCGTGTTCCG CGGCTTCCAC TACGGGATCG ACTTCGCCGG CGGCACCACG
CTGACCTTCC AGCCGGTCGA CAGTGCGTCC GTGTCCAACT CGCAGATCGC GCAGACGGTC
ACCTCGGCCA CCGGGGTGGA GACCGAGTCG GTGCAGACGG TCGGCAACCA GATCCAGGTG
ACCTCCTCGT CGCTGAGCGT GGACCAGGTG GTCGCGGCCA AGGCGGCGAT CAACCAGGCC
TACTCGCCGC CCGGCGGCGT GTCCGACTCG GCGGTGTCCG AGACCTGGGG ATCGGAGATC
TCCCAGCGGG CGCTGCTCGC GGTGCTGGTC TTCCTGGTCG CGGTGGCCGC GTTCCTGTGG
ATCCGGTACG AAAAACGGAT GGCCGCCGGC GCGGTGGTCT CGGTGCTGCA CGACCTGATC
ATCACGGCCG GCATCTACTC GCTGGTCGGG TTCGAGGTGA CCCCGGCGAC CGTGATCGGC
CTGCTGACGA TCCTGGGTTT CTCCCTCTAC GACACCGTCG TGGTCTACGA CAAGGTGCAG
GAGAACACCA AGGGCCTGAC CTCGCTCAAC CGGCGCACCT ACCCGGAAGC GGCGAACCTG
GCGATCAACC AGACGCTGAT GCGCTCGATC AACACCTCGC TGATCGCGCT GCTGCCGGTG
GCCGGGCTGC TGGTCGCCGG CGTGGTCATC CTGGGCTCGG GCACCCTCAA GGACCTCTCG
CTGGTCATGC TGATCGGCAT GCTCATCGGC GCCTACTCGT CGGTGTTCGT CGCGGTGCCG
TTCGCGGTGG ACCTCAAGCT GCGCGATCCG GCGATCAAGG CCCACACCGC GCGGGTGCTG
GCCAAGCGCA AGGCCGAGGG GTTGGTCGTG GACGCCGACG GCGACCCGAT CGCCCGGACC
GGAGGGCCGG CCCGTGTGGC CGCCGCGGCC GCGAGCTCGC CGGTCGCCAC CGCGACAGCC
AGCTCGACGG CCACCTCGAC GGCCACCGCC GTCCGGCCGG ATGCGAAGCC GGGGGCGGCG
CCCAAGCCCG GGGTCAAGCC GGTGCGGCCC ACCGGCAAGA CCGGTCCGCG CGGCAAATCG
GGCTCCGGGC CCAAGCCGTC CGGCAAGCGC AGCCGCTGA
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| Protein sequence | MSVDDGLDTP AAVSAAATGD KLYGRQAGFL SRLSTGTGAF NILGRRKVYY IVSSALVVAS
ILLIVFRGFH YGIDFAGGTT LTFQPVDSAS VSNSQIAQTV TSATGVETES VQTVGNQIQV
TSSSLSVDQV VAAKAAINQA YSPPGGVSDS AVSETWGSEI SQRALLAVLV FLVAVAAFLW
IRYEKRMAAG AVVSVLHDLI ITAGIYSLVG FEVTPATVIG LLTILGFSLY DTVVVYDKVQ
ENTKGLTSLN RRTYPEAANL AINQTLMRSI NTSLIALLPV AGLLVAGVVI LGSGTLKDLS
LVMLIGMLIG AYSSVFVAVP FAVDLKLRDP AIKAHTARVL AKRKAEGLVV DADGDPIART
GGPARVAAAA ASSPVATATA SSTATSTATA VRPDAKPGAA PKPGVKPVRP TGKTGPRGKS
GSGPKPSGKR SR
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