Gene Namu_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3352 
Symbol 
ID8448967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3688900 
End bp3689790 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content72% 
IMG OID645042429 
ProductMyo-inosose-2 dehydratase 
Protein accessionYP_003202669 
Protein GI258653513 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0467219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0568196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCGAACCCCG TTCCGCCGTC GACCGGATCG CCGGCGCCCC GATCTCCTGG 
GGCGTGTGCG AGGTGCCCGG GTGGGGGTAC CAGCTCACGC CCGAGCGCGT GCTCGCCGAG
ATGCGTGAGG TGGGCCTGTC GGCCACCGAG TTCGGCCCGG ACGGGTTCCT GCCGGCCGAC
CCGCAGCAGA TGGCCACCGT GCTGGCCGAC CACCACCTGA CCGCGGTCGG CGGCTTCGTC
CCGGTCGTGA TGTACCGGCC CGACCACGAC CCGGTGCCCG ACATCGAGCG GCTCATCCCC
GGCTTCCTGG CCGCCCACGG CTCGACCATG GTGCTGTCCG CCGACTCCGG CCTGACCGGC
TACGACAGCC GGCCCGAGCT GGACGAGCAG GGCTGGGCCA CCCTGCTGGG CAACCTGGAC
CGGGTCACCG CCCTGGCCGC CGAGCACGGC ATCACCGCCG TCCTGCACCC GCACGTGGGC
ACCATGGTCG AGAACCCGGC CGACGTCCGG CGCGTGCTGG AGGGCTCGAG CATCTCGCTG
TGTCTGGACA CCGGGCACCT GCTGATCGGC GGCACCGACC CGGCCGAGCT CACCCGGCAG
GCCCCCGAAC GGGTCGCCCA CACCCACCTC AAGGACGTCG ACAACTCGAT CGCCGAGAAG
GTCCGCTCCG GCCGGCTCAC CTACACCGAC GCGGTGCGGG CGGGTATGTA CCGGCCCCTG
GGCACCGGCG ACGTGGACGT CGAGTCGATC CTGACCACGT TGCGACGCAA CGACTATCAG
GGCTGGTTCG TGTTGGAGCA GGACACCATC CTGACCGCGG AGCCGACCTT CGAGGGGCCG
GTGGGCGACG TGCGCACCAG CGCCGACTAC GTGCGCAGCC TGCTCGGCTG A
 
Protein sequence
MTTTEPRSAV DRIAGAPISW GVCEVPGWGY QLTPERVLAE MREVGLSATE FGPDGFLPAD 
PQQMATVLAD HHLTAVGGFV PVVMYRPDHD PVPDIERLIP GFLAAHGSTM VLSADSGLTG
YDSRPELDEQ GWATLLGNLD RVTALAAEHG ITAVLHPHVG TMVENPADVR RVLEGSSISL
CLDTGHLLIG GTDPAELTRQ APERVAHTHL KDVDNSIAEK VRSGRLTYTD AVRAGMYRPL
GTGDVDVESI LTTLRRNDYQ GWFVLEQDTI LTAEPTFEGP VGDVRTSADY VRSLLG