| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3349 |
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| Symbol | |
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| ID | 8448964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3685711 |
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| End bp | 3686484 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645042426 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003202666 |
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| Protein GI | 258653510 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.120871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0223593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCT CCCGCCCGCC GCAACGCACC GCCGTGATCA CCGGAGTGGG CGCCGAGCGC
GGCATCGGCC GGGCCACCGC GCACCGCTTC GCCCGGGACG GCTGGGCCAT CGTCGGCCTC
GACCTGGACG GCGACGCCGC GGAAAAGCTG GCCGCCGAGT TGACCGAGCG CTACGGCGTG
CCCGCGTTCG GCGCTGCGGT GGACGTTGCC GACGAAGCGT CGGTCCTGGC GGTGCGGGAC
GCGGTCGCCG CGGCGAACCT GCCCACGGTT GGGGCCGTGC TCAACATCGC CGGTATCACC
TCACCCGTGC CGTTCCTGGA CACCACCGTC GAGCTGTGGA ACCGGATCTT CGCGGTCAAC
GTCACCGGCA CCTACCTGGT GACCAAGGCG TTCCTGCCGG ACATGATCGC CGGCGGCTAC
GGCCGGGTGT TGAACATGTC CTCGGTGTCC GCGCAACAGG GCGGCGGCGT CTTCGGCAAG
ACCCCCTACT CCTCGGCCAA GGCCGCGGTC CTGGGCTTCA CCAAGGCGCT GGCCCGCGAA
CTCGGCCCCA CCGGCATCAC CGTCAACGCC CTCACGCCGG GCGCGGTCGA CACCGACATC
CGGGTCCACG GCACCACCCC CGAGATCGAG GAGGCCATCG TCAAGTCGAT CCCGCTGGGT
CGGCAGGCCT CGGTGGACGA CGTCACCAGC CTGTTCGCGT TCCTGGCTTC CGAGGAGGCC
GGTTACCTGA CCGGCACCAC CCAGAACGTC AACGGCGGCT CCTACTTCTC CTGA
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| Protein sequence | MTISRPPQRT AVITGVGAER GIGRATAHRF ARDGWAIVGL DLDGDAAEKL AAELTERYGV
PAFGAAVDVA DEASVLAVRD AVAAANLPTV GAVLNIAGIT SPVPFLDTTV ELWNRIFAVN
VTGTYLVTKA FLPDMIAGGY GRVLNMSSVS AQQGGGVFGK TPYSSAKAAV LGFTKALARE
LGPTGITVNA LTPGAVDTDI RVHGTTPEIE EAIVKSIPLG RQASVDDVTS LFAFLASEEA
GYLTGTTQNV NGGSYFS
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