| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3348 |
|---|
| Symbol | |
|---|
| ID | 8448963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3684819 |
|---|
| End bp | 3685673 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645042425 |
|---|
| Product | Transketolase domain protein |
|---|
| Protein accession | YP_003202665 |
|---|
| Protein GI | 258653509 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3959] Transketolase, N-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0304302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0226218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAA CCGTTGACCG GGGCACCCGG GTGGCCGACC TGGCCGCCGC CGCCGACCGG
ATCCGGCACC ACATCCTGGA CATGGGCGAA GTCCAGGGCC AGGGCTACGT CGGCCAGGGA
CTGGGCTTCG CCGACGTCCT CGCCGTGATC TACAAAGACC TCGCCAACCT GCGCCCGCAG
GACCCGGAGT GGTTCGACCG GGATCGGGTC CTGCTGTCCA TGGGCCACTA CGCCATCGCC
GAGTACGCCG CACTGGCCGA GGCCGGCACC CTGTCAGTCG ACGAACTCGA GACCTATGGC
TCGGACGACT CGCGGCTGCC GATGTCCGGC ATGTCCACCT ACACCCCCGG CATGGAAATC
TCCGGCGGCT CCCTGGGCCA CGGCCTGGGC GTCGCCGTTG GCATGGCCCT GGGACTGCGG
TTCCAGGGCA ACCCCGCCCG GGTCATCAAC ATGATGAGCG ACGGCGAACT GGACGAGGGC
TCGACCTGGG AGGCGGCGAT GGCCGCCGCC CACCACGGCC TGGGCAACCT GCTGTGCGTG
GTCGATGTCA ACCAGCTGCA GGCCGACGGT CCGACCGCCG GAGTGCTGCG CACCGAACCC
CTGATCGACA AGTGGCAGGC CTTCGGCTGG CGCACCGTCC GCGTGGACGG CAACGACATC
GACGCCCTGG TCACCGCTTT CGAGTCGGTG CCACCCGGTG ACACACCCGC GGTGGTGCTG
TGTGACACCC GCATCGGGCG GGGGGTGCCG TTCCTGGAGA CCCGGGAAAA GGCGCACTTC
ATCCGCATCG ACGAGCACGA ATGGGACCTC GCCCGCCAGG CGCTGCGCGC CGCCAACCCC
GCTGGGAGCA ACTGA
|
|---|
| Protein sequence | MTQTVDRGTR VADLAAAADR IRHHILDMGE VQGQGYVGQG LGFADVLAVI YKDLANLRPQ
DPEWFDRDRV LLSMGHYAIA EYAALAEAGT LSVDELETYG SDDSRLPMSG MSTYTPGMEI
SGGSLGHGLG VAVGMALGLR FQGNPARVIN MMSDGELDEG STWEAAMAAA HHGLGNLLCV
VDVNQLQADG PTAGVLRTEP LIDKWQAFGW RTVRVDGNDI DALVTAFESV PPGDTPAVVL
CDTRIGRGVP FLETREKAHF IRIDEHEWDL ARQALRAANP AGSN
|
|---|
| |