Gene Namu_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3344 
Symbol 
ID8448959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3681078 
End bp3682166 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content72% 
IMG OID645042421 
ProductRadical SAM domain protein 
Protein accessionYP_003202661 
Protein GI258653505 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000768449 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0781434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTGGC AGGAGCAGGT GCTGGCAACC GACGACCCGT CCGCGTTGCC CGGGATGAGC 
CGGTTGGCCG GGTTGGTGCG CTCGGTCCGC ACTCCCGAAT TCGCGGGGGT GACCTTCCAC
GAGGTGCACG CCAAGTCGGC GCTGAACCGG GTGCCCGGCG GCTCGCCGAT GCCGTTCGCC
TGGACGGTCA ATCCCTATCG GGGCTGCACC CACGGGTGCG TCTACTGTTT CGCCCGAAAG
TCGCACACCT ACCTGGATTT CGACTCCGGG GCGGATTTCG ATCAGCAGAT CGTGGTCAAG
ACCAACGTGG GTTCGGTGCT GCGCAAGGAG GTCGGCTCGC CGCGCTGGCG GCGCGAGCAC
GTGGCGATGG GCACCAACAC CGACCCCTAT CAGCGGGCCG AGGGCCGGTA CCGGTTGATG
CCGGAGATCA TCGGCGCGCT GGCCGACAGT GGAACCCCGT TCTCCATCCT GACCAAGGGC
ACCGTGCTCT CCCGGGACCT GCCGCTGCTG GCCGCGGCCG GCCGGTCGGT GCCGGTCGGG
GTGGGGGTGT CGTTAGCCCT GCTGGATCCC GAGCTGCAGG CGACCCTGGA ACCGGGCACG
CCCAGCCCGA AGGCGCGGCT CGACCTGGTG CGGCGGATCC GGGACGCGGG CCTGCCGTGC
GGGGTGTTCG TCGCGCCGAT CCTGCCGTTC CTGACCGATG GCCCGGACCA GATCCGGGCG
CTGGTGCGTC AGCTGGCCGA CGCCGGCGCG ACCGGGGTCA GCGGCATCGG CCTGCATCTG
CGGCCGGGGG CGCGGGAGTG GTTCTTCGGC TGGCTCGGCC GGACCCGGCC CGACCTGGTG
GACCGCTACC ACAAGCTCTA TGCCGGGGGC GCGAACCTGC CCGCCGACTA CCGCAAGGAG
CTGGCCGGAC GGGTCCGGCG GATCAGTGCC GAGTTCGCGC TCGGGGCGGG GGCGGACAGC
CAGCTCGCCG GGCGCAATCC GGTGCGGGGG GTGCCGGGGG ATCGAGAGGC CTCGTTCCCG
GCCGGCAGCC TGCCGGCCCG TTCCGCCGAT GAGCCGGCCC CGGCGACGGC CGCACCAACC
CTGTTCTAA
 
Protein sequence
MRWQEQVLAT DDPSALPGMS RLAGLVRSVR TPEFAGVTFH EVHAKSALNR VPGGSPMPFA 
WTVNPYRGCT HGCVYCFARK SHTYLDFDSG ADFDQQIVVK TNVGSVLRKE VGSPRWRREH
VAMGTNTDPY QRAEGRYRLM PEIIGALADS GTPFSILTKG TVLSRDLPLL AAAGRSVPVG
VGVSLALLDP ELQATLEPGT PSPKARLDLV RRIRDAGLPC GVFVAPILPF LTDGPDQIRA
LVRQLADAGA TGVSGIGLHL RPGAREWFFG WLGRTRPDLV DRYHKLYAGG ANLPADYRKE
LAGRVRRISA EFALGAGADS QLAGRNPVRG VPGDREASFP AGSLPARSAD EPAPATAAPT
LF