| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3335 |
|---|
| Symbol | aspS |
|---|
| ID | 8448950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3671765 |
|---|
| End bp | 3673564 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645042412 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_003202652 |
|---|
| Protein GI | 258653496 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0540844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0126547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCCGCG ATCGCAACGC CGGTTCCCTG CGCCCCACCG ACGACGGCAC CACCGTCACC
CTGGCCGGTT GGGTGGCTCG TCGACGCGAT CACGGCGGCG TCATCTTCAT CGACCTGCGG
GACGCCTCCG GGGTGGCCCA GGTAGTGTTC CACTCGGGCG AGGTACTGGC CGCCGCGCAC
CAGCTGCGCA GCGAGTACTG CGTGCGGGTG ACCGGGACCG TGGCCATCCG GCCGGCCGGC
AACGAGAACC CCGACCTGCC CACCGGCGCG ATCGAGGTCG AGGCCCTCAC CCTGGAGGTG
CTCTCGGAGT CCGCGCCGCT GCCCTTCCAG ATCGACGACA CGATCTCGGT CGGCGAGGAG
ACCCGGCTCA AGTACCGCTA CCTGGACCTG CGCCGGGCGG CCCCGGCGCA CGCGCTGCGG
CTGCGGGCCA AGGTCAGCCG GGCGGCCCGG GACGTGCTCG ACGACGCCGG CTTCGTGGAG
ATCGAGACCC CGACGCTGAC CCGCAGCACC CCCGAAGGGG CCCGCGACTT CCTGGTTCCG
GCCCGCCTGC GGCCCGGTTC CTGGTACGCG CTGCCGCAGT CGCCGCAGCT GTTCAAGCAG
CTGCTGATGG TGGCCGGGAT GGAGCGGTAC TACCAGATCG CCCGCTGCTA CCGGGACGAG
GACTTCCGCG CCGACCGGCA GCCCGAGTTC ACCCAGCTCG ACATCGAGAT GTCCTTCGTC
GAGCAGGACG ACGTGATCGC CATCGGCGAG CAGGTGATCG CCAGCCTGTG GCGGCTGATC
GGGCACGAGA TCAGCACGCC CATCCCGCGG ATCAGCTTCC GCGAGGCGAT GGACAAGTAC
GGTTCGGACA AGCCCGACCT GCGGTTCGAC CTGCAGCTCA CCGAACTGAC CGACTACTTC
GCCAGCACCC CGTTCCGGGT CTTCCAGGCG CCCTACGTCG GGGCCGTCGT GCAGAAGGGC
GGCGCCAGCA CGCCCCGCCG CGGCTTCGAC GCCTGGCAGG AGTGGGCCAA GCAGCGCGGC
GCCCGCGGTC TGGCCTACGT CACCATCGCC GCCGATGGAA CCCTGGGCGG CCCGGTGGCC
AAGAACATCT CCGAGGACGA GCGGGCCGGG CTGGCCGCGG CGGTCGGCGC CGAGCCGGGC
GACGCGGTGT TCTTCGGCGC CGGCACCCGC AGGTCCACCC AGGAGCTGCT CGGCGCGGCC
CGGCTGGAGA TCGGCCGGCG CGGCGGGCTG ATCGACGAGG ACGCCTGGTC GTTCGTGTGG
GTGGTCGACG CGCCCCTGTT CGAGCGCACC GACGAGACCG ACGATGTGAC GGTCGGCGGC
GCCGGCAGCA CCTGGACCGC CGTGCACCAC GCGTTCACCT CGCCCAAGCC CGAGTGCCTG
GACACCTTCG ACACCGACCC GGGCTCGGCG CTGGCCTACG CCTACGACAT CGTCTGCAAC
GGCAACGAGA TCGGCGGCGG CTCGATCCGT ATCCATCGGG CCGACGTGCA GGAACGCGTC
TTCGCCGTGA TGGGGCTGAC CCCCGAGGAC GCCCAGACCA AGTTCGGGTT CCTGCTGGAG
GCGTTCAGCT TCGGCGCCCC GCCGCACGGC GGCATCGCCT TCGGCTGGGA CCGGATCGTC
ATGCTGCTGG CCAAGGCGAC GTCGCTGCGC GAGGTCATCG CCTTCCCCAA GTCCGGCGGC
GGCTTCGATC CGCTGACCGC GGCCCCCGCG CCGATCACCC CGGAGCAGCG CAAGGAGGCC
GGGGTGGACT ACGTGCCGCC CAAGCCGGCC AAGGCGACCG AGTCGAGCAC GCCCAGCTGA
|
|---|
| Protein sequence | MLRDRNAGSL RPTDDGTTVT LAGWVARRRD HGGVIFIDLR DASGVAQVVF HSGEVLAAAH
QLRSEYCVRV TGTVAIRPAG NENPDLPTGA IEVEALTLEV LSESAPLPFQ IDDTISVGEE
TRLKYRYLDL RRAAPAHALR LRAKVSRAAR DVLDDAGFVE IETPTLTRST PEGARDFLVP
ARLRPGSWYA LPQSPQLFKQ LLMVAGMERY YQIARCYRDE DFRADRQPEF TQLDIEMSFV
EQDDVIAIGE QVIASLWRLI GHEISTPIPR ISFREAMDKY GSDKPDLRFD LQLTELTDYF
ASTPFRVFQA PYVGAVVQKG GASTPRRGFD AWQEWAKQRG ARGLAYVTIA ADGTLGGPVA
KNISEDERAG LAAAVGAEPG DAVFFGAGTR RSTQELLGAA RLEIGRRGGL IDEDAWSFVW
VVDAPLFERT DETDDVTVGG AGSTWTAVHH AFTSPKPECL DTFDTDPGSA LAYAYDIVCN
GNEIGGGSIR IHRADVQERV FAVMGLTPED AQTKFGFLLE AFSFGAPPHG GIAFGWDRIV
MLLAKATSLR EVIAFPKSGG GFDPLTAAPA PITPEQRKEA GVDYVPPKPA KATESSTPS
|
|---|
| |