| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3334 |
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| Symbol | |
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| ID | 8448949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3668242 |
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| End bp | 3671661 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645042411 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_003202651 |
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| Protein GI | 258653495 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.387126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0234354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCATCA AGGTGGCGCT CGAGCACCGC ACGTCCTACC GCTTCGACCG TTTGGTGACG
ATCCACCCGC ACGTGGTCCG GCTGCGGCCG GCGCCGCATT CGCGGACCAC GATCGAGTCG
TACTCGCTGA CCGTCGAGCC GGCCAACCAC TTCGTGAACT GGCAGCAGGA TCCGTTCGGC
AACTTCATGG CCCGGCTGGT GTTCCCGGAG CGGGCCCGCG AGCTGACCAT CACCGTCGGC
CTGGTCGCCG ACCTGGCCGT GGTCAACCCG TTCGACTTCT TCATCGAGGA CTACGCCGAG
CACTACGGCT TCACCTACCC GGCCGAGCTG GCCGCCGACC TGGAGCCGTA CCTGCGGCCG
GTCGACGAGG GCGGCCCGGG CAGCGGGCCG GGGCCACTGG TTCGCGGCTG GCTCAAGGAC
TTCACGGTCG CCGACCAGAC CCGGATCGTG GACTTCCTGG TCCAGATCAA CGCCGCGGTG
CAGCGCTCGG TGGGTTACTC GGTGCGGATG GAGCCGGGCG TGCAGACCCC GGACCACACC
CTGTCCACGG CGATCGGGTC CTGCCGGGAC TCGGCCTGGT TGCTGGTCTC GCTGCTGCGC
GAGCTGGGCC TGGCCGCGCG TTTCGTCTCC GGCTACCTGG TGCAGCTGAC CTCCGACGTG
CCGTCGCTGG ACGGCCCGTC CGGCCCGGCC GCCGACTTCA CCGACCTGCA CGCCTGGGCC
GAGGTCTACA TCCCGGGCGC CGGCTGGATC GGCATGGACC CCACCTCGGG GCTGTTCGCC
GGCGAGGGCC ACATCCCGCT GTCGGCCACG CCGCACCCCT CCACGGCCGC GGCGATCAGC
GGGTCGACCG GGATCGCGCA GACCACGCTG GAGTACTCCA ACGTCGTCCG GCGGGTGCAC
GAGGACCCGC GGGTCACCCT GCCCTACATC TCCGAACAGT GGGTGGCCGT GCAGAAGGTC
GGCCAGGAGG TCGACCGCCG GCTGACCGAG GCGGACGTGC GGCTGACCAT GGGCGGCGAA
CCCACCTTCG TCTCCATCGA CGACCTGACC GCGCCGGAAT GGACGATCGC CGCGGACGGC
CCGCAGAAGC GGGAACGGGC CGGCGTGCTG GCCCAGCGGC TGCGTGGCAT CTACGCGGCG
AACGGCATCG TGCATCGTGG GCAGGGCAAG TGGTACCCGG GCGAGCCGCT GCCGCGTTGG
CAGATCGTGC TGCACTGGCG GGCCGACGGC CAGCCGCTGT GGTCCGATCC GAGCCTGTTC
GCCGATCCGT GGGCCGAGCC GTCGGACAGC TTGGCGTCGG GGGCGGCGCC GGACGCCGGC
GACCAGCGGC GGGACGCGGG CGTCGCGGAG GCCGGCGCCT TCGCCGAGTC CATCGCCGCC
TACTTCGGAC TGCCCCAGTC CCAGGTGCGA CCGGCCTTCG AGGACCCGCT GGCCAAGCTG
GCCGCGCTGG TCCGGCTGCC GGCCGGGGAG CCGGTCAGCC AGGACCTGAC CGACGACTCA
CCGGACGCCC GGGCCGAATT GCTGACCACG CTCGATGAAT CGGTGGAGAC GCCGACCGCG
TTCGTGCTGC CGCTGCATCG ACTGGCCGCC CCGGCCGAGG ACCGGGGCGA TCCCGACGAC
GCGGCGGCCG AGCCGGCCAC CGTCGGCTGG GCCAGCGCCG ACTGGCGGCT GCGCCGCGGC
CGGATCGTGC TGGTGCCCGG CGATTCTCCG GCCGGGCTGC GGCTGCCGCT GGACGCCATC
TCCTGGCAGG AGCCGGAACC GCCGGTCGAC CCGGATCCGC TGGAGGCCAA GCCGGAGCTG
CCGGCCACCC AGCTGCACCG GCCGCGGGCG ATCGTGGTCG AGGCGACCGG CGCGCCGACC
ACCGCCCTGG TGATCGAGGC CCGCGGCGGC CTGATCCACG TGTTCCTGCC GCCGATCCAG
GAGCTCGACC CGTGGGTCGA ACTGATCGGC GCCATCGACC ACGCCGCGTC CAGCCTGGGC
CTGCCGCTGG TGCTGGAGGG TTACCCGCCG CCCAACGACC CGCGCCTGAA AACCCTGTCG
GTGACGCCGG ATCCGGGCGT CATCGAGGTC AACGTCCAGC CGGTGGCCGG CTGGGACGAG
CAGGTCGCGC TGACCACCAC GCTGTACGAG CAGGCCCGGC TGAGCCGGCT GGGCACCGAG
ACGTTCGCGG TCGACGGCAG CCATCGGGGG ACCGGCGGCG GCAACCACAT CACCGTCGGT
GGCGCGACCC CGGCCGAGTC GCCGTTGCTG CGCCGACCGG ACCTGCTGGT CTCGCTGCTG
ACCCACTGGC AGCGGCACCC GGCCCTGTCC TACCTGTTCT CCGGTCAGTT CATCGGCCCG
ACCTCGCAGG CCCCGCGGGC CGACGAGGGC CGGCCCGAGT CGCTGTACGA GATGGAGATC
GCGTTCTCGG AGATCGAGCG GGCGATCGCC CGGGCGGGTG GCCGGCCCGA CGGGTCGGCC
GCGCCGTGGG TGGTGGACCG GGCGCTGCGG CACCTGCTGA CCGACCTGAC CGGCAACACC
CACCGCGCCG AGTTCTGCAT CGACAAGCTC TACAGCCCGG ACTCGGCCCG CGGCCGGCTC
GGGCTGCTGG AACTGCGCGG CTTCGAGATG CCGCCGCACG CCCAGATGGC GCTGGTGCAG
GCCCTGCTGG TGCGATCGCT GGTGTCCCGG TTCTGGGACG AGCCGCTGCG GGCCCCGCTG
ATCCGGCACG GGGACAACCT GCACGGCCGA TACCTGTTGC CGCACTATGT GATCTCCGAC
ATCGCCGAGG TGGCCGCGGA TCTGCGGGCG CACGGCATCG ACTTCCAGAC CAGTTGGCTG
GACCCGTTCT TCGAGTTCCG GTTCCCCCGG CTGGGCACGG TGACGGTCGG CGGCATGGGC
CTGGAGCTGC GTTGGGCGAT CGAGCCCTGG CACGTGCTGG GGGAGGAGGC CACCGCCGGC
GGCACCGCCC GCTACGTCGA CTCCTCGGTG GAGCGGCTGC AGGTCAGCCT GACCGGGGCC
TCCGGTCCCG GGCAGGTGTG GGTGACCTGC AACGGCTATC CGGTCCCGCT GCAGCCGACC
CACGTGCCGG GCCTGCTGGT CGCCGGCGTC CGCTACCGGG CCTGGCAGCC GCCGAGCTCG
CTGCACCCGA CCATCCCGTC GGATTCGCCG CTGGTCTTCG ACGTGGTCGA CGCGGTCAGC
GGAGTCTCGT TGGGCGGGGC CACCTATCAC GTCTCGCATC CGGGCGGTCG CAGCTACGAG
ACCCCGCCGG TGAACGCGAT GGAAGCCGAG TCGCGGCGGA CCCGCCGGTT CGACGCGGCC
GGGCACAGCC CGGGCGAGAT CGACATCAAC CAGTTGCGGG AACGGGCGGG CCTGCTCGCC
GTCGACCACA ACGCCCCGGG CATGCTCGAT CTGCGCCGGG CCAGGGCCAT CTGCCGGTGA
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| Protein sequence | MGIKVALEHR TSYRFDRLVT IHPHVVRLRP APHSRTTIES YSLTVEPANH FVNWQQDPFG
NFMARLVFPE RARELTITVG LVADLAVVNP FDFFIEDYAE HYGFTYPAEL AADLEPYLRP
VDEGGPGSGP GPLVRGWLKD FTVADQTRIV DFLVQINAAV QRSVGYSVRM EPGVQTPDHT
LSTAIGSCRD SAWLLVSLLR ELGLAARFVS GYLVQLTSDV PSLDGPSGPA ADFTDLHAWA
EVYIPGAGWI GMDPTSGLFA GEGHIPLSAT PHPSTAAAIS GSTGIAQTTL EYSNVVRRVH
EDPRVTLPYI SEQWVAVQKV GQEVDRRLTE ADVRLTMGGE PTFVSIDDLT APEWTIAADG
PQKRERAGVL AQRLRGIYAA NGIVHRGQGK WYPGEPLPRW QIVLHWRADG QPLWSDPSLF
ADPWAEPSDS LASGAAPDAG DQRRDAGVAE AGAFAESIAA YFGLPQSQVR PAFEDPLAKL
AALVRLPAGE PVSQDLTDDS PDARAELLTT LDESVETPTA FVLPLHRLAA PAEDRGDPDD
AAAEPATVGW ASADWRLRRG RIVLVPGDSP AGLRLPLDAI SWQEPEPPVD PDPLEAKPEL
PATQLHRPRA IVVEATGAPT TALVIEARGG LIHVFLPPIQ ELDPWVELIG AIDHAASSLG
LPLVLEGYPP PNDPRLKTLS VTPDPGVIEV NVQPVAGWDE QVALTTTLYE QARLSRLGTE
TFAVDGSHRG TGGGNHITVG GATPAESPLL RRPDLLVSLL THWQRHPALS YLFSGQFIGP
TSQAPRADEG RPESLYEMEI AFSEIERAIA RAGGRPDGSA APWVVDRALR HLLTDLTGNT
HRAEFCIDKL YSPDSARGRL GLLELRGFEM PPHAQMALVQ ALLVRSLVSR FWDEPLRAPL
IRHGDNLHGR YLLPHYVISD IAEVAADLRA HGIDFQTSWL DPFFEFRFPR LGTVTVGGMG
LELRWAIEPW HVLGEEATAG GTARYVDSSV ERLQVSLTGA SGPGQVWVTC NGYPVPLQPT
HVPGLLVAGV RYRAWQPPSS LHPTIPSDSP LVFDVVDAVS GVSLGGATYH VSHPGGRSYE
TPPVNAMEAE SRRTRRFDAA GHSPGEIDIN QLRERAGLLA VDHNAPGMLD LRRARAICR
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