| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3302 |
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| Symbol | |
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| ID | 8448917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3629267 |
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| End bp | 3630967 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645042381 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003202621 |
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| Protein GI | 258653465 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.15105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0149256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG AGGAAACCGT GGCCTTCAGC GACATCACGG CCGACCTGGA GTCGACCCCC
GGCCAGGACT GGCGCCGCAC CGCGGTCGTC TACCAGATCT ACCCGCGCTC GTTCGCCGAC
TCCAACGGTG ACGGGATCGG CGACCTGCCC GGGATCAACC ATCGCCTGCC GGCCCTGGCC
GAGCTGGGCG TGGACGCCAT CTGGCTGTCC CCCTTCTACA AGTCCCCGCA GGCCGACGCC
GGGTACGACG TGGCCGACTA CCGCGACGTC GACCCCGTTT TCGGCACCCT GGCGGACTTC
GACGCGATGC TCGAGCGGGC CCACGGGCTG GGTCTGAAGG TGATCGTCGA CCTGGTGCCC
AACCATTCCT CCGACGAGCA CGTCTGGTTC CAGCAGGCCC TGGCCGCGGC CCCCGGCTCC
CCCGAGCGGG ACCGCTACGT CTTCCGCGAG GGACGCGGCG AGCACGGCGA GCTGCCGCCG
AACAACTGGG AATCCTGCTT CCGCGGGCCG GCCTGGACCC GGACCACCAA CCCCGACGGC
ACCCCCGGCC AGTGGTACCT GCACCTGTTC GACACCAAGC AGCCCGACTG GAACTGGGAG
AACCCGCAGG TTCGGGCCGA GTTCCTGGAC GTGTTGCGGT TCTGGCTGGA CCGCGGCGTG
GACGGCTTCC GGGTGGACGT GGCCCACGCG CTGATCAAGG CCCCGGGCCT GCCCGACATG
AAGGCCTCCG ACGAGGTCGT CGAGGACAGT GAGGGCTACT TCCACACCGG CCCCATGTGG
GACCAGGACC GGGTGCACGA GGTCTACCGG GAGTGGCGGG CCCTGCTGGA CACCTACTCC
CCCGACCGGA TCCTGTGCGC CGAGGCGTGG GTGCCCTCGC TGTCCCGGCT GGCCCGCTAC
GTCCGCGAGG ACGAGATGCA CCAGGCGTTC AACTTCGACT ACCTGGAGAG CGAGTGGGAC
GCCACCCACC TGCGCTCGGT GATCGATTCC TCGGTCGCCG CCAACGACGA GGTCGGCGCG
CCCACCACCT GGGTGCTGTC CAACCACGAT GTGGTCCGCC ATGTCTCGCG GCTGGGCCTG
CCGGCCGGTC CGCGGCCCAA CGGCATCCGG GCCCAGGATC AGCAACCCGA CTACCAGCTC
GGCCTGCGCC GGGCCCGGGC GTCGACCCTG TTGATGCTGG CCCTGCCCGG TTCGGCCTAT
ATCTACCAGG GCGAGGAGCT CGGGCTGCCC GACCACACCG AGCTCGACGA CGACCTGCGT
CAGGACCCGA CCTGGTGGCG CTCCGGTTAC ACCGAGGCCG GCCGCGACGG CTGCCGCGTG
CCGCTGCCCT GGGAGGCCGG CGAGCCCGGC CTGGGCTTCG GACCGGGCGG CGCGACCTGG
CTGCCGCAGC CCGCGTCCTA CGCGGAGCTG GCTCGTGACA AGCAGGAGGA CGTCGAGGGT
TCGACCCTGG AGATGTACCG CACCGCGCTG GCGTTCCGGC GCGCGTTCGC GCTCGCCGTC
GGCGACCTGG AGTGGGTCGA CGCCGAGCCG GGCGTCGTGC GGTTCGTCAA CGGTGAACTG
ACCATCGCCG CCAACACCGG GACCGAAGCG GTTCCGATGC CGGTCGGCGA GCTGCTGATG
GCCTCCGGCG AGCTGACCGA TCACTCGGTG CTCCCGCCCG ACACCACGGT CTGGTTGCTC
ACCGAGGTCT TCAGCGAGTA G
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| Protein sequence | MTIEETVAFS DITADLESTP GQDWRRTAVV YQIYPRSFAD SNGDGIGDLP GINHRLPALA
ELGVDAIWLS PFYKSPQADA GYDVADYRDV DPVFGTLADF DAMLERAHGL GLKVIVDLVP
NHSSDEHVWF QQALAAAPGS PERDRYVFRE GRGEHGELPP NNWESCFRGP AWTRTTNPDG
TPGQWYLHLF DTKQPDWNWE NPQVRAEFLD VLRFWLDRGV DGFRVDVAHA LIKAPGLPDM
KASDEVVEDS EGYFHTGPMW DQDRVHEVYR EWRALLDTYS PDRILCAEAW VPSLSRLARY
VREDEMHQAF NFDYLESEWD ATHLRSVIDS SVAANDEVGA PTTWVLSNHD VVRHVSRLGL
PAGPRPNGIR AQDQQPDYQL GLRRARASTL LMLALPGSAY IYQGEELGLP DHTELDDDLR
QDPTWWRSGY TEAGRDGCRV PLPWEAGEPG LGFGPGGATW LPQPASYAEL ARDKQEDVEG
STLEMYRTAL AFRRAFALAV GDLEWVDAEP GVVRFVNGEL TIAANTGTEA VPMPVGELLM
ASGELTDHSV LPPDTTVWLL TEVFSE
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