Gene Namu_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3277 
Symbol 
ID8448892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3606832 
End bp3607347 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content73% 
IMG OID645042357 
Productprotein tyrosine phosphatase 
Protein accessionYP_003202597 
Protein GI258653441 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000374545 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00508467 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACATCGG AGCTTCGGAT CGCCGCCGAC CCCCGGCTGC ACGTCTGCGT GGTCTGCACC 
GGCAACATCT GCCGCTCCCC CATCGGCGAG CAGGTGCTGC GGCGCGCCCT GCAGGAGGCC
GGGCTCGACG ACCAGGTCCG GGTGAGCAGC GCCGGCACCG GCGACTGGCA CGTGGGCGCC
GGCGCGCACC GCGGTTCGGT CCGGGTGCTG GCCGAGGCCG GCTATCCGAC CGAGCACACC
GCACGGCAGT TGACCCGGGC CGATCTGGCC GAGATCGACC TGGTGCTGGC GGCCGATCGG
GATCACCGCG CCCTGGTCAA GCGGATGCTG AGCGAGCCGG AGCGGGACAA GGTCCGGCTG
CTGCGGGATT TCGACCCGGA CGCCGACGGC GACGAGGTCC CCGACCCGTA CTACGGCCCG
CACCAGGGGT TCGTCGAGGT GTTGACGATG ACGCAGGCGG CGGTGCCCGG CGTTATCGCC
GAGATCCGGC GGCTGCTGGC CGAGCAGGAC CGATGA
 
Protein sequence
MTSELRIAAD PRLHVCVVCT GNICRSPIGE QVLRRALQEA GLDDQVRVSS AGTGDWHVGA 
GAHRGSVRVL AEAGYPTEHT ARQLTRADLA EIDLVLAADR DHRALVKRML SEPERDKVRL
LRDFDPDADG DEVPDPYYGP HQGFVEVLTM TQAAVPGVIA EIRRLLAEQD R