Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3230 |
Symbol | |
ID | 8448844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3559148 |
End bp | 3560092 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645042309 |
Product | ROK family protein |
Protein accession | YP_003202550 |
Protein GI | 258653394 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00029412 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000117185 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAAGA CCATCGGCAT CGACATCGGC GGTACCTCGG TGCGCGCGGC CGTCATCGAC GGCATCTCCA TCGGCCCGTC CCTGCGTGAG GCCACCCCGC ACACCGAACG GGAGACCGAG GACCTGCTGG TCACGCTGAT CACCAAGTTG GCGGCCAGCC AGCCGGTGTC CGCGGTCGGG CTGGCCGTGG CCGGGTTCGT CAGCGCCGAC CGGCAGCGGG TCATGTTCGC CCCGCACCTG GCCTGGCGGG ACGCTCCGGT GCCCGAGCGG GTGTCCGCCC GGGTGGGCCT GCCGGTAGTG ATGGACCACG ACGTGAACTC CGCGGCCTGG GCCGAGTACC GCCTGGGCGT GTCCGCGGGA TCCTCCATCG CCCTGCTGGT CGCCCTGGGC ACGGGGATCG GTGCCGGGCT GCTCGTCGAC GGCCAGATCT ACCGCGGGGC GCACGGCGTG GCGCCCGAGC TCGGTCACCT GACCGTCGTC CCCGGCGGCC GGCCCTGCCC GTGCGGCAAG CAAGGGTGCT GGGAGCGTTA CTGCTCGGGC ACCGCGTTGG CCCAGACTGC CCGGCTGCAG ATGGCCGACC ATGACGCGCC GGTGCTGCGC CGACTGTCCG GGGACGACCC GGCCGCCGTC ACCGGGACCA TGGTCGCGGT GGCCGCCACC GAGGGCGACC CGGTCGCCCT GGGCGCGATG GACGAGCTCG GCCATTGGCT GGCCGCCGGC CTGGCGCTGG TCACCGACGT GCTCGACCCG GAGATGATCG TGATCGGCGG TGGGGTGTCG GCCGCGGCCG GCATGTTCCT GCCGCTGGCC GTGTCCGAGT TCGGCCGGTC CATCACCGGC GCCGGCCACC GGCCGTTGCC ACGGGTCGAA CTGGCCCGGT TCGGCGACCG GGCCGGCATC ATTGGGGCCG CGCTGCTGGC GGCCGAGGCC GCCGGCACCG CCTGA
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Protein sequence | MSKTIGIDIG GTSVRAAVID GISIGPSLRE ATPHTERETE DLLVTLITKL AASQPVSAVG LAVAGFVSAD RQRVMFAPHL AWRDAPVPER VSARVGLPVV MDHDVNSAAW AEYRLGVSAG SSIALLVALG TGIGAGLLVD GQIYRGAHGV APELGHLTVV PGGRPCPCGK QGCWERYCSG TALAQTARLQ MADHDAPVLR RLSGDDPAAV TGTMVAVAAT EGDPVALGAM DELGHWLAAG LALVTDVLDP EMIVIGGGVS AAAGMFLPLA VSEFGRSITG AGHRPLPRVE LARFGDRAGI IGAALLAAEA AGTA
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