| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3200 |
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| Symbol | |
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| ID | 8448814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3524503 |
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| End bp | 3526287 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645042280 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_003202521 |
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| Protein GI | 258653365 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000473135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00151321 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGC GTCAACCGCA GTTCCACCAC CGGGCCGCCG GGTTCGTCAT CGCCCTCGGC
TTCCTGATCG GCGCGGCCAT CCTGATCGCG CCCATCGCGA ATGCCGCCGA CACCACGGTC
GACGATGCGG TGACCAGTGG CGCCAACTAC TTCACCTACA CCGGCTCGTC CTGGACCAGC
TGCGGCGGCT GCAACAGCAC CGCCACCAAC AACAGCTACC GCTACGCCTA CACCACCGGC
AACAAAGCCG TCCTGACCTT CACCGGCACC CAAGCCACCA TCTACGGCTT CAAAGAACCC
CCCGGCGGCA TCGGCAGTTT CGCCGTCGAC AACGGCCCCA CCACCGACAT CGACTTCTAC
GCCGCCACCC AAACCCTCAC CGCCGTCTAC ACCACCCCCA CCCTCACCAA CACCACCCAC
ACCATCACCA TCACCGTCAC CGGCCGCAAG ACCAACGGCG CCTCCCCCAC CATCAACATC
GACAAGGCCG TCATCGCAAC AACAACCGGC GCCGGTACCA CCACCCCCAC CAGCACCACC
ACCCCCACCA GCACGGCCAC CACCACCCGA ACCACCACCC CCACCAGCAC CACCACCCAG
CCGACGGTCA CCCCGCCGAC CACTCCCCCG GCGACCGGGG TGACCGTTGA TGATGCGGTG
ACCAGTGGCG CCAACTACTT CACCTACACC GGCTCGTCCT GGACCAGCTG CGGCGGCTGC
AACAGCACCG CCACGAACAA CAGCTACCGC TACGCCTACA CCACCGGCAA CAAAGCCGTC
CTGACCTTCA CCGGCACCCA AGCCACCATC TACGGCTTCA AAGAACCCCC CGGCGGCATC
GGCAGTTTCG CCGTCGACAA CGGCCCCACC ACCGACATCG ACTTCTACGC CGCCACCCAA
ACCCTCACCG CCGTCTACAC CACCCCCACC CTCACCAACA CCACCCACAC CATCACCATC
ACCGTCACCG GCCGCAAGAC CAACGGCGCC TCCCCCACCA TCAACATCGA CAAGGCCGTC
ATCGCAACAA CAACCGGCAC CGGTACCCCC ACCCCGACCA GCACCACCAC CCCCACCAGC
ACGGGCACCA CCACCCGAAC CACCACCCCC ACCACCACCC AGCCGGGCGG GACGGGCATC
GCCAGCATCA CCTTCGATGA CGGCACGATC GGCCAATACA CCTATGCGCG GCCACTTCTC
GTGCAACGCT CGCTTCCGGC GACCTTCTTC ATCATCTCGG ACGCGCTCGG CTGGACAGGC
ACCAACATGA ACGCGACCCA GGTCCGGCAA CTCGTCGCCG ACGGCGACGA GATCGGCAAT
CACACCCGTG ACCACACGAA CCTGGCCACG CTGTCGGCGA GTCAGGTCAG CGCGGAGTTC
ACCCATTCAC AAACGGTCAT CGCCAACCAG ATCGGGGTGA CCCCCACGAC GTGCGCCTAT
CCGTACGGCA GTCACAACTC CACCGTCGAT TCGGTTGCCG GGAATTTCTT TCGTGGGTGC
CGGGAAACGG GTGGAGGATT GAACACGTCG GGCTCGTTGC GGCCGTACGC GCTCACCAAT
TACTACGTCG GCCAGACCAC CACGGCCGCC GACATCCGCA ACGCCGCCGA ACAGGCGAAG
GCGCAGAATG CCTGGGTCAT CTTCACCTAT CACGGCGTCG ACCCGAGCGG GACCGGCTCG
GAGGACGTCA CCCCGACGAA CCTGGCCGCG CAACTGGACG CCCTCCGGTC CACCGGGATC
CCCGTCGTCA CGGTGAGCGC GGCACTGTCG GCCTATGGCC GCTGA
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| Protein sequence | MSQRQPQFHH RAAGFVIALG FLIGAAILIA PIANAADTTV DDAVTSGANY FTYTGSSWTS
CGGCNSTATN NSYRYAYTTG NKAVLTFTGT QATIYGFKEP PGGIGSFAVD NGPTTDIDFY
AATQTLTAVY TTPTLTNTTH TITITVTGRK TNGASPTINI DKAVIATTTG AGTTTPTSTT
TPTSTATTTR TTTPTSTTTQ PTVTPPTTPP ATGVTVDDAV TSGANYFTYT GSSWTSCGGC
NSTATNNSYR YAYTTGNKAV LTFTGTQATI YGFKEPPGGI GSFAVDNGPT TDIDFYAATQ
TLTAVYTTPT LTNTTHTITI TVTGRKTNGA SPTINIDKAV IATTTGTGTP TPTSTTTPTS
TGTTTRTTTP TTTQPGGTGI ASITFDDGTI GQYTYARPLL VQRSLPATFF IISDALGWTG
TNMNATQVRQ LVADGDEIGN HTRDHTNLAT LSASQVSAEF THSQTVIANQ IGVTPTTCAY
PYGSHNSTVD SVAGNFFRGC RETGGGLNTS GSLRPYALTN YYVGQTTTAA DIRNAAEQAK
AQNAWVIFTY HGVDPSGTGS EDVTPTNLAA QLDALRSTGI PVVTVSAALS AYGR
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