| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3188 |
|---|
| Symbol | |
|---|
| ID | 8448802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3511235 |
|---|
| End bp | 3512278 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645042268 |
|---|
| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
|---|
| Protein accession | YP_003202509 |
|---|
| Protein GI | 258653353 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.054684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000508135 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCG TACTGGAAGA GCAGGCCGAG AAGGCGCGCT CGGTCCTGAC TCCCGAGGTC
TTCGACTACT ACGACGCGGG TTCCGGCGAC CAGCTCACCC GGGCCGAGTC CGGGGCGGCG
TGGGCCGACT ACCGCTTCCG GCCGTTCCCG TTGCGGGACG TCAGCGCCGT GGACACCGCC
TCGACCGCGC TGGGTGTGCC GGTCGCCACG CCGATCGCCA TTGCTCCGTC CGCGTTCCAG
CGACTGGCCC ATCCCGACGG TGAACGGGCC ACCGCCGCCG CCGCCGGCCA GGCCGGATCG
CTGTTCGTGC TCTCGACCCG GGCGTCGTTG CCGATCGCCG AGGTGGCGGC CGCCGCCACC
GGGCCATGGT GGTTCCAGGT CTACGTGATG CGTGACCGCG AACTCACCCG GCGCGTGGTG
GCCGATGCGG TGACCGCGGG CGCCCGCGCG CTGGTGCTCA CCGGCGACAC CCCGTACGTC
GGACGCAAAC GGCAGGTTCG TGGCACCCGC ATCCCGTTGC CCGACGACCA CTTCCTGGTC
AACATCGCCC CCCACCTGGC CCCCGGGGTC GACGGGCGCG CGGCCGCCGC CCAGGATCCG
TCGATCGGTC TGGAGACGAT CGACTGGCTG CGCCGGGAGT TCGGCCTGCC GGTGCTGGTC
AAGGGCGTGC TGCGCGGCGA CGCTGCGGAC GAGTGCCTGC GCGCCGGTGC CGCCGGGGTG
ATCGTGTCCA ATCACGGCGG CCGGCAGCTG GATCGCGCGG TGCCCAGCGC GCACGCCCTG
GGCGACGTCG TCGACGCGGT GGCCGGACGC GCCCCGGTCT ACGTCGACGG CGGAATCTCC
TGCGGCCTAG ACGTTCTGAC CGCCCTCGCC CTGGGCGCCC ACGGGGTGCT CATCGGGCGA
CCGGTGCTGT GGGCGCTGGC CGCGGGCGGC TGCCAGGCGG TCGCCGACAC GCTCAGCGCC
ATGACCGACG ACCTGCGCCA CGCCATGGCG CTGACCGGCG TCGCCGGTCT GGACCAGATC
AACCGCAGCC TGCTGCATCA CTGA
|
|---|
| Protein sequence | MLAVLEEQAE KARSVLTPEV FDYYDAGSGD QLTRAESGAA WADYRFRPFP LRDVSAVDTA
STALGVPVAT PIAIAPSAFQ RLAHPDGERA TAAAAGQAGS LFVLSTRASL PIAEVAAAAT
GPWWFQVYVM RDRELTRRVV ADAVTAGARA LVLTGDTPYV GRKRQVRGTR IPLPDDHFLV
NIAPHLAPGV DGRAAAAQDP SIGLETIDWL RREFGLPVLV KGVLRGDAAD ECLRAGAAGV
IVSNHGGRQL DRAVPSAHAL GDVVDAVAGR APVYVDGGIS CGLDVLTALA LGAHGVLIGR
PVLWALAAGG CQAVADTLSA MTDDLRHAMA LTGVAGLDQI NRSLLHH
|
|---|
| |