Gene Namu_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3182 
Symbol 
ID8448796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3504533 
End bp3505537 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID645042262 
Producthypothetical protein 
Protein accessionYP_003202503 
Protein GI258653347 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3469] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000313674 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000145488 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCTCGA CCACCGGCGA GGGGCGAGCG ATCAGCAGGC GGCATGCGAT CTCCGTGCTG 
GGGATGCTCG CCGGCGGGTT GGCGACCGGA ACCGTGGCCG CCTGTTCCGG ACCTGGCACC
AGCGACGGAA TCGCGACACC CGCAACAGAA CAAGCTGTTT CACCGCCGTC CAGCACCGCA
CCGCGCCCGC CCCGGCCCGA CCGGATCGTG TCGATGTGGA TGTTCGACTG GCAGCCACCG
ACGATCGACG AACTCCCCGC CGACGTGCTG GACACGCTGA GCATGCTGGT CGTGGCGATG
GCGCAGTCCG CTCGTTCGGG CAGCGGACTC CTGCATTTTC GCCCCAATCG GACCACGGCC
GAGGAAATGG CTTCGCATAT CGACACAGTC GTGCGCAGTG GCCGACCCGT CCTCATTGGA
ATCGGTGGTC AGAATGACGG CGGGATCACC GTGACAAACG ACACGCAGGT CGAGGAGTTT
TGTGACTCGG TGAGCCAGCT CGTCACCAAT TACGGATTCA CCGGAATCGA CCTGGACCTG
GAGCCCTCGG GCAGCACCTG GACCCAGGAA GCTCTGGTCG CCGCGGTCCG CCGGCTGAAG
TCCGAATTCG GGCCCGACTT TCTCGTCGGG ATCACCGCGG CGCTCTACGG CGAGCACACC
GCACGATGGC TCACGCTCGC CGATGCGCTC GCCGACTCCT ACGACTTCTT CGCCCACATG
CTCTACGACT ACGTCGAAGC GACCGATGGC CGCCTCGAAC AGGATGCCCT GCGCAAGGTC
GGCATTGCGG TGGCCGGCGG GATCCCCGCG GCCAAGCAGG TGCTCGGCTT CATGTGCAAC
ACCTCCACCT ACAGCAGTCC GGTGACGCTC ACCGGATCGA CCTGGTCCAC CACCGTGGCC
CGGTACCCCG ACCTGCTCGG CGCCTTCATC TGGGAGTCCT CCATCGAGGC ACGGGTGGAC
TACGAATGGA CCCGCTCGGT GGGGGCGGCC ATCGCTGATC GGTGA
 
Protein sequence
MTSTTGEGRA ISRRHAISVL GMLAGGLATG TVAACSGPGT SDGIATPATE QAVSPPSSTA 
PRPPRPDRIV SMWMFDWQPP TIDELPADVL DTLSMLVVAM AQSARSGSGL LHFRPNRTTA
EEMASHIDTV VRSGRPVLIG IGGQNDGGIT VTNDTQVEEF CDSVSQLVTN YGFTGIDLDL
EPSGSTWTQE ALVAAVRRLK SEFGPDFLVG ITAALYGEHT ARWLTLADAL ADSYDFFAHM
LYDYVEATDG RLEQDALRKV GIAVAGGIPA AKQVLGFMCN TSTYSSPVTL TGSTWSTTVA
RYPDLLGAFI WESSIEARVD YEWTRSVGAA IADR