| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3176 |
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| Symbol | |
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| ID | 8448790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3497711 |
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| End bp | 3499759 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645042256 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003202497 |
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| Protein GI | 258653341 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000122162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000126185 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTACCC GTACCCGCAA GAAGCCGGTC CAGCGCATCC CTCCGACCGT CGGTACCCGG
CCCCTGGGCC GGATCCCGGT GGCCGACGTC TTCCCCATCG TCGACGACGG CACCCGCCCG
TCGAAGTCGG TGGTGGGGGA GGAGTTCGAC ATCACCGCCA GCGTGTACCG GGAGGGTCAT
GACGCGGTCA ACGCCAACGT TGTCCTGACC GACCCGGCCG GCGCGACCAC GGTGCTGCCG
ATGACCTGCA TCAATCCCGG GTTGGACCAG TGGTCGGTGA CGGTCAGCGC GCCGACCACC
GGCCTGTGGA CCTACCGGGT GGAGGGCTGG TCGGACCCGT ACGGGACCTG GCACCACGAC
GCGACGATCA AGGTCGCCGC GGACGTGGAC ACCGAGGTGA TGCTGGAGGA GGGCGCCCGC
GTGCTGGAGC GGGCGCTGGC CGCCGTGGAG CGCACCCCGG AGCAGGCGGC GGTGCTGCAG
GACGCCATCG GCAAGCTGCG CGACACCGCC CACTCGCCCG GGAACCGGTT GGGGGCAGGC
GTTTCGGCCG CGGTGGAGCA GGAACTGGCG GCCCGCCCGC TGCGTGAGTT CGTCTCGCCC
AGCCCCGACT ACCCGTGGCT GGTCGAGCGG GAACGGGCGC TGTACGGAGC GTGGTACGAG
TTCTTCCCCC GCTCGGAGGG GTGCTGGTTC AACGAGGAAA CCGGCCTGTG GCACAGCGGT
ACCTTCGCGA CCGCCGCCGA GCGGTTGCCG GCGGTGGCCG AGATGGGCTT CGACGTCATC
TACCTCACCC CGATCCACCC GATCGGCCGG GTGAACCGCA AGGGCCCGAA CAACACCCTG
ATCGTCGATG AGCACGATCC CGGGTCGCCC TACGCGATCG GCGCGGCCGA GGGCGGGCAC
GACGCGATCC ATCCCGAGCT GGGCACGTTC GACGATTTCG ACGCGTTCGT AGCCCGGGCC
CGCGAGCTGG GCCTGGAGGT GGCCCTGGAC ATCGCGCTGC AGTGTGCGCC CGACCATCCC
TGGGTCACCG AGCACCCGGA GTGGTTCACC ACGCGCAACG ACGGCACCAT CGCCTACGCC
GAGAACCCGC CCAAGAAGTA CCAGGACATC TACCCGCTCA ACTTCGACAA CGACCCCAAG
GGCATCTACG CCGAGGTGCG CCGGGTGATC CAGGTCTGGC TCGATCACGG CGTCCGCATC
TTCCGGGTGG ACAACCCGCA CACCAAGCCG GTCGAGTTCT GGGAGTGGTT GATCGGCGAC
GTCGCCCTGG ACTACCCCGA GACCATCTGG CTGGCCGAGG CTTTCACCCG GCCGGCGATG
ATGCACGGAC TGGGCAAGGT CGGCTTCCAG CAGTCCTACA CCTACTACGC GTGGCGCAAC
GAGAAGTGGG ACCTGGAGAG CTACTGCCAG GAACTGGCCC GCGACTCGGC GCACTACATG
CGGCCGAGCT TCTGGCCGAC CACGCACGAC ATCCTCACCC CGTACATGAC CAATGGTGGC
CCGGCGGCCT GGAAGCTGCG GGCCGCGCTG GCCGCGACGC TGGTGCCCAC CTACGGCATC
TACGCCGGGT ACGAGCTGAT GGAGGCGCAG CCGCGGCCGG GTGCGCAGGA ACAGATCGAC
AACGAGAAGT ACCAGTTCAA GAACCGGCAC TGGGAGGACT ACGAGCAGTA CGGGTCCAAG
TCCGGCCAGT CGATCGGCTG GTGGCTGGCG ATGATCAACC GGATCCGGCG CGAGCACCCG
TCCCTGCACT GGCTGCGCAA CCTGCGTTTC CACAACGCCG AGAACTCCAG CGTGATGGTG
TTCTCCAAGC GCCGGGTCCT GCCCGACGGG CGCGACGACA CCATCATCGT GGTGGCCAAC
CTCGATCCGC ACCACAACCA GTCCACCTGG TTCCACCTGA ACATGCCCGA GCTCGGCCTG
CACTGGGACG ACTCGTTCCC GGCCCATGAT CTGGTCACCG GCGCGACATG GCACTGGTCG
CAGCACAACT GGAGTTGGCT CGGGCCGGAG AACGAGCCCG TGCACATTGT CCAGGTGGGG
AGATACTGA
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| Protein sequence | MATRTRKKPV QRIPPTVGTR PLGRIPVADV FPIVDDGTRP SKSVVGEEFD ITASVYREGH
DAVNANVVLT DPAGATTVLP MTCINPGLDQ WSVTVSAPTT GLWTYRVEGW SDPYGTWHHD
ATIKVAADVD TEVMLEEGAR VLERALAAVE RTPEQAAVLQ DAIGKLRDTA HSPGNRLGAG
VSAAVEQELA ARPLREFVSP SPDYPWLVER ERALYGAWYE FFPRSEGCWF NEETGLWHSG
TFATAAERLP AVAEMGFDVI YLTPIHPIGR VNRKGPNNTL IVDEHDPGSP YAIGAAEGGH
DAIHPELGTF DDFDAFVARA RELGLEVALD IALQCAPDHP WVTEHPEWFT TRNDGTIAYA
ENPPKKYQDI YPLNFDNDPK GIYAEVRRVI QVWLDHGVRI FRVDNPHTKP VEFWEWLIGD
VALDYPETIW LAEAFTRPAM MHGLGKVGFQ QSYTYYAWRN EKWDLESYCQ ELARDSAHYM
RPSFWPTTHD ILTPYMTNGG PAAWKLRAAL AATLVPTYGI YAGYELMEAQ PRPGAQEQID
NEKYQFKNRH WEDYEQYGSK SGQSIGWWLA MINRIRREHP SLHWLRNLRF HNAENSSVMV
FSKRRVLPDG RDDTIIVVAN LDPHHNQSTW FHLNMPELGL HWDDSFPAHD LVTGATWHWS
QHNWSWLGPE NEPVHIVQVG RY
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