| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3172 |
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| Symbol | dnaE |
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| ID | 8448786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3492687 |
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| End bp | 3496214 |
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| Gene Length | 3528 bp |
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| Protein Length | 1175 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645042252 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_003202493 |
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| Protein GI | 258653337 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.450877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000979148 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCAACA CCGACTCCTT CGTCCACCTG CACGTGCACA CCGAGTACTC GATGCTCGAC
GGTGCGGCCA GGCTGGGGGA GCTGTTCGCG CGGACCGCCG AACTGGGCAT GCCCGCGCTG
GCCATGACCG ACCACGGCAA CGTCTTCGGG GCGCACGACT TCTACCGGCA GGCCCGGGCG
GCCGGGGTGA ACCCCATCAT CGGCATGGAG GCCTACCTCA CCCCGAACAC CTCGCGGTTC
GACAAGACCC GGGTCCGGTG GGCCGACGGC GGCGACGACG ACGTGTCCGG CGCCGGTGCC
TACACCCACA TCACCCTGCT CTCGGAAACC ACGCAGGGCA TGCACAACCT GTTCCGGCTG
GCCTCGCGGG CCTCGCTGGA GGGCTTCTTC TACAAGCCGC GCGCCGACCG CGAGCTGCTG
TCGGAATATT CGGCCGGACT GATCGGCACC ACCGGCTGCC CGTCCGGCGA GGTGCAGACC
TGGCTGCGGA TCGGCAACTA CGACAAGGCG CTGGCCTCGG CGGCCGAGTT CCGGGACATC
CTGGGCAAGG AGAACTACTT CGTCGAGCTG ATGGACCACG GGTTGTCCAT CGAAACCCGG
GTGCGCGACG GGTTGATCCG GCTGGCCCGC GACCTGCAGC TGCCGATGAT CGCCACCAAC
GACCTGCATT ACACGAACAA GGCCGACGCG AGCGCGCACG AGGCGCTGCT GTGCGTGCAG
TCCGGCAAGA CCCTGGACGA CCCGAACCGG TTCAAGTTTG ACGCGGACGA CTTCTACCTC
AAGTCGCCGG CCGAGATGCG GGCCCTGTGG GCGGACAAAT ACGACCTGCG GGAGGCCTGC
GACAACACCC TGCTGATCGC CGAGCGGTGT TCGGTCGCCT TCGACGAGGC GTCCTCCTAC
ATGCCGCGCT TCCCGGTGCC GGCGGGGGAG ACCGAGCAGA CCTGGTTCGT CAAGGAGGTC
GACAAGGGGC TGGCCATCCG GTTCCCCGGC GGCATCCCGC CCGAGGTGCG CAAGCAGGCC
GACTACGAGG TCGGCGTCAT CACCGCGATG AACTTCCCCG GCTACTTCCT GGTCGTGGCC
GACTTCATCA ACTGGGCCAA GGACCACGGC ATCCGGGTCG GCCCGGGTCG TGGCTCGGGC
GCCGGGTCGA TGGTGGCCTA CGCGATGCGG ATCACCGACC TGAACCCGCT GGTGCACGGG
CTGATCTTCG AACGGTTCCT GAACCCGGAC CGGGTGTCCA TGCCCGACTT CGACGTGGAC
TTCGACGAAC GCCGGCGCGG TGACGTCATC CGTTACGTCA CCGAGCGCTA CGGCGACGAC
CGGGTCGCCC AGATCGTCAC CTACGGCACC ATCAAGGCCA AGCAGGCGGT CAAGGACTCG
GCCCGGGTGC TGGGCATGCC GTTCTCGGTC GGCGACCGGA TCACCAAGGT GATGCCGCCG
CCGGTCATGG GCAAGGACGT GCCGCTGTCG AAGATCTTCG AGCCGTCCGA CCCCCGGTAC
AACGAGGGCA CCGAGTTCCG CACCCTGGTC GACACCGACC CGGACGTGCG CAAGGTGGTG
GACACCGCCC GCGGGCTGGA GGGGCTCAAG CGGCAGTGGG GGGTGCACGC GGCCGGCGTC
ATCATGTCCT CGGCGCCGCT GCTGGACCTG ATCCCGATCA TGAAGCGGGA GCAGGACGGG
GCGATCATCA CCCAGTTCGA CTACCCGACC TGCGAAAAGC TCGGCCTCAT CAAGATGGAC
TTCCTGGGGC TGCGCAACCT GACCATTTTG GACGACGCAG TCGGCAACAT CCGGGCCAAC
CGGGAGATCG ACCTGGTCCT GGAAGACCTG CCGCTGGACG ACAAGGCGAC CTACGAGCTG
CTGTCCCGGG GTGACACCCT GGGCGTGTTC CAGCTCGACG GCGGTCCGAT GCGCGCCCTG
CTGCGGTCGA TGCGGCCGGA CAACTTCGAG GACATCTCGG CGGTCATCGC CCTGTACCGG
CCGGGCCCGA TGGGGGCCAA CTCGCACAAC GAGTACGCGG ACCGCAAGAC CGGCCGCAAG
CCGGTCACGC CCATCCACCC CGAGCTGGCC GACGCGCTGC AGGACCTGTT GGGCGACACC
TACGGGCTGA TCGTCTACCA GGAGCAGGTG ATGGCGATCG CCCAGCACCT GGCCGGGTAC
ACCCTGGGCG CCGCCGATCT GCTGCGCCGG GCCATGGGCA AGAAGAAGAA GGCCGAACTG
GACGCCCAGT ACGAGACCTT CTCCGGCGGG ATGGCCGGTC GCGGCTACTC GCCGCACGCG
ATCAAGACGC TCTGGGACAT CCTGCTGCCG TTCTCGGACT ACGCGTTCAA CAAGGCGCAC
TCGGCGGCCT ACGGGATGCT GTCCTACTGG ACCGCCTACC TCAAGGCCAA CTACCCGGCC
GAGTACATGG CCGCGCTGCT CACCTCGGTC GGCGACGACA AGGACAAGAT GGCCATCTAC
CTGGCCGAAT GTCGCTCCAT GGGGATCAAG GTGATGGCGC CGGACGTCAA CGCCAGCGTG
CAGAACTTCG CCCCGGTCGG CACCGACATC CGGTTCGGTC TGTCCGCGAT CCGCAACGTG
GGCACCGGGG TGGTGGCCTC CATCGTGGCC TGCCGCAAGG ACAAGGGCGC CTACACCGAC
TTCTACGACT TCCTGGACAA GGTCGACGCC ACCGCCTGCA ACAAGAAGGT GGTCGAGTCG
CTGATCAAGG CCGGCGCCTT CGACTCGATG GGTCACCCGC GCAAGGGCCT GCTGATGGAC
CATGTCCGGG CCATCGACGA GGTGCTGGGC CTGAAGAAGG CCGAGGCGAT CGGTCAGTTC
GACCTGTTCG GCGAGATGAG CCAGGAGGAG AAGGGCGACA CCTTCCGCGG CAACGTCCCG
GACACCGAGT GGGACACCAA GCTGCGGCTC GGTTTCGAGC GGGAGATGCT GGGCCTGTAC
GTCTCCGGCC ATCCGCTGGC CGGTGTCGAG CACATCCTGT CGGCCCAGTC GGACGCGTCC
ATCCCCGACG TGCTCGACGG CACTATCCCG GACCGGGCGC TGATCACCGT CGGCGGGATC
CTGACCAACC TGCAGCGCCG GCTGACCAAG AAGGGCGACC CCTGGGCCTC GGCCACCCTG
GAGGACCTGG CCGGTGGCGT CGAGGTCGCC TTCTTCCCCA AGGTCTACCT GGAGACCGCG
ATGCTGCTGG CCGAGGACGC CATCGTGCTG GTCAAGGCGC GGGTGGCCCG TTCGGAGGAC
CGGCTCTCGC TGCACGCGCA GTCGGTCGTG GTGCCCGACC TGTCCAACGA CCCGGGCAAG
GGTCCGGTGC AGGTCTCCAT CGCCGCGCAG CGGTGCACCC CGCCGGTGGT GGACCGGCTC
AAGGACGTGC TGCAGGCCCA TCCGGGCACC ACCGCCGTGC ACCTCAAGCT GCTCAACGGC
TCCCGGATCA CCACCCTCAA GCTCGACGAC GGGCTGCGGG TGACCCGCAC GTCGGCGCTG
ATCGGCGACC TCAAGGCGCT GCTCGGCGCG GACTGCATCG CCTCGTGA
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| Protein sequence | MSNTDSFVHL HVHTEYSMLD GAARLGELFA RTAELGMPAL AMTDHGNVFG AHDFYRQARA
AGVNPIIGME AYLTPNTSRF DKTRVRWADG GDDDVSGAGA YTHITLLSET TQGMHNLFRL
ASRASLEGFF YKPRADRELL SEYSAGLIGT TGCPSGEVQT WLRIGNYDKA LASAAEFRDI
LGKENYFVEL MDHGLSIETR VRDGLIRLAR DLQLPMIATN DLHYTNKADA SAHEALLCVQ
SGKTLDDPNR FKFDADDFYL KSPAEMRALW ADKYDLREAC DNTLLIAERC SVAFDEASSY
MPRFPVPAGE TEQTWFVKEV DKGLAIRFPG GIPPEVRKQA DYEVGVITAM NFPGYFLVVA
DFINWAKDHG IRVGPGRGSG AGSMVAYAMR ITDLNPLVHG LIFERFLNPD RVSMPDFDVD
FDERRRGDVI RYVTERYGDD RVAQIVTYGT IKAKQAVKDS ARVLGMPFSV GDRITKVMPP
PVMGKDVPLS KIFEPSDPRY NEGTEFRTLV DTDPDVRKVV DTARGLEGLK RQWGVHAAGV
IMSSAPLLDL IPIMKREQDG AIITQFDYPT CEKLGLIKMD FLGLRNLTIL DDAVGNIRAN
REIDLVLEDL PLDDKATYEL LSRGDTLGVF QLDGGPMRAL LRSMRPDNFE DISAVIALYR
PGPMGANSHN EYADRKTGRK PVTPIHPELA DALQDLLGDT YGLIVYQEQV MAIAQHLAGY
TLGAADLLRR AMGKKKKAEL DAQYETFSGG MAGRGYSPHA IKTLWDILLP FSDYAFNKAH
SAAYGMLSYW TAYLKANYPA EYMAALLTSV GDDKDKMAIY LAECRSMGIK VMAPDVNASV
QNFAPVGTDI RFGLSAIRNV GTGVVASIVA CRKDKGAYTD FYDFLDKVDA TACNKKVVES
LIKAGAFDSM GHPRKGLLMD HVRAIDEVLG LKKAEAIGQF DLFGEMSQEE KGDTFRGNVP
DTEWDTKLRL GFEREMLGLY VSGHPLAGVE HILSAQSDAS IPDVLDGTIP DRALITVGGI
LTNLQRRLTK KGDPWASATL EDLAGGVEVA FFPKVYLETA MLLAEDAIVL VKARVARSED
RLSLHAQSVV VPDLSNDPGK GPVQVSIAAQ RCTPPVVDRL KDVLQAHPGT TAVHLKLLNG
SRITTLKLDD GLRVTRTSAL IGDLKALLGA DCIAS
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