Gene Namu_3155 details

Gene Information

• Locus tag: Namu_3155
• Symbol: dnaE2
• ID: 8448769
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nakamurella multipartita DSM 44233
• Kingdom: Bacteria
• Replicon accession: NC_013235
• Strand: -
• Start bp: 3474461
• End bp: 3477739
• Gene Length: 3279 bp
• Protein Length: 1092 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 645042236
• Product: error-prone DNA polymerase
• Protein accession: YP_003202477
• Protein GI: 258653321
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00446252
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.000661117
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGGCTGGA CCAACCCGAA CGTGCCGTGG AGCGAGCTGG AACGGGCCCT GTCCGGCCGC 
CCACCCGCGC CCGGCCGCGG GCCGCTGCAG GCGATCCGGC ACTGGCAGCA GGACCGGCCC 
GACCCGCCGC CGATCCCGAC CGGGCCGCCG ACCGCGGTGC CCTACGCCGA GCTGCACTGC 
CACTCCGCGT TCAGCTTCCT GGACGGCGCG TCCACCCCCG AGCAGCTGGT CGCCGAGGCG 
GTGCGGCTGG GGCTGGAGGC GCTGGCGATC ACCGACCACG ACGGCCTGTA CGGCATCGTC 
CGGTTCGCCG AGGCGGCTCG CGAGGCCGGC CTGCGCACCC TGTACGGCGC CGAGCTGTCC 
CTGGGCCTGC CCGAACCGCA GCTGGGCGTG CCCGACCCGG TCGGCGAGCA CCTGCTGGTG 
CTGGCCCGCG GCCAGGAGGG CTACCACCGG CTGTCCACCC AGATCAGCCG GGCTCAGCTG 
GCCGGCGGCG CGAAGGGCCG GCCGGTCTAC GACCTGGACG AGCTGGCCGA CGCCGCCGGT 
GGGCACTGGC TGATCCTCAC CGGCTGCCGC AAGGGCAGCG TCCGCCGCGC CCTGCAGCGG 
CACGGCCCGG CCCGCGCCGC CGAGGAGCTG CGCGCGCTGA TGGACCGGTT CGGCCGGGAC 
AACGTCGTCG TCGAACTGAC CACCAGCCTG GCGCCGACCG ACGACGAGGA CAACGACGCC 
CTGGCCGCGC TGGCCGCCGA GCTGGACCTG CCGATCGTCG CGACCACGGC CGCCCACTAC 
GCCACCCCGG CCGAGGGGCG GATCGCCGCG GCGATGGCCG CGGTCCGGGC CCGCCGCAGC 
CTGGAGGAGG CCGACCCCTA CCTGCCCGCC GGCCCGGGGT CGCACCTGCG CTCGGGCGCC 
GAGATGGCCG CCCTGTTCGC CCGGTACCCG GCCGCGGTGC CCACCGCCGC CGCGATCGGC 
CGGGAGTGCT CGTTCGACCT GCGGCTGCTC GCGCCCAAGC TGCCGCCCTA CGACGTGCCC 
CCCGGCCACG ACGAGAACTC GCACCTGCGC CAGCTCACCC TGGCCGGCGC GGCCCGCCGC 
TACGGCTCGC CCGACGACCG GCCGGACGCG TACGCGCAGA TCGAGAAGGA GCTGGGGATC 
ATCGCCCGGC TCGACTTCCC CGGCTACTTC CTGATCGTCA ACGACATCGT CGACTTCTGC 
CGCCGCAGCG ACATCCTGTG CCAGGGCCGC GGGTCGGCCG CCAACTCCGC GGTCTGTTAC 
GCGCTGGGCA TCACCGCGGT GGACGCGGTG CGCTACGAGC TGCTGTTCGA ACGGTTCCTG 
GCCCCCGAGC GGGACGGCCC GCCGGACATC GACGTGGACA TCGAGTCCGA CCGGCGGGAG 
GAGGTGATCC AGTACGTGTT CGCCACCTAC GGCCGGGACA AGGCGGCCCA GGTCGCCAAC 
GTCAACACCT ACCGGCCGCG GATGGCGGTG CGGGACATGG CCAAGGCGCT GGGCCATTCA 
CCCGGCCAGC AGGACGCCTA CTCCAAGCAG CTGGACGGCT GGGTGCCGCT GGCCGGGCAG 
GACGCCAGCG GCATCCCGGC GGACGTGCTG GCCCTGGCCC ACCGGATCCA GGACTACCCC 
CGGCACCTGA GCATCCACTC CGGCGGCATG GTCATCTGCG ACCGGCCGGT CGCCTCGGTG 
TGCCCGGTGG AGTGGGCCCG GATGGAGAAC CGGTCGGTGC TGCAGTGGGA CAAGGACGAC 
TGCGCCGCGA TGGGCCTGGT CAAGTTCGAC CTGCTGGGCC TGGGCATGCT CTCGGCCCTG 
CACTACGCGG TCGACCTGAT CCGGGAACAC GAGGGCCTGG AGATCGACTT CGCCCAGCTC 
GACCTGGAGG AGCCGGCGGT CTACGAGATG CTGCAGCGGG CCGACTCGGT CGGGGTGTTC 
CAGGTGGAGT CCCGCGCCCA GATGGCCACC CTGCCCCGGC TCAAGCCGCG CACCTTCTAC 
GACCTGGTGG TCGAGGTCGC GCTGATCCGC CCCGGGCCGA TCCAGGGCAA CGCGGTGCAC 
CCCTACATCC GCCGCCGCAA CGGTCAGGAG GAGGTCACCT ACGACCACCC GGTGATGGAG 
AAGTCGCTGG CCAAGACCCT GGGCATCCCG CTGTTCCAGG AGCAGCTGAT GCAGCTGGCG 
GTGGACGTCG CCGGGTTCGA CGCCGGGGAG GCCGACCAGC TGCGCCGGGC GATGGGGGCC 
AAGCGGTCCA AGGGAAAGAT GGAAAAGCTC AAGGCCCGCC TGTACGACGG GATGCGGGAG 
CGGCACGGCA TCACCGGCCC GGTCGCCGAC CGCATCTACG AACGGCTGCT GGCGTTCGCC 
AACTTCGGGT TCGCCGAGTC GCACGCGCTC TCGTTCGCGG CGCTGGTCTT CTACTCGGCC 
TGGCTCAAGC TGCACCACCC GGCCGCCTTC TGCGCCGCGC TGCTGCGGGC CCAGCCGATG 
GGCTTCTACT CGCCGCAGTC GCTGGTCGCC GACGCCCGGC GGCACGGGGT GAGCATCCGC 
CGCCCGGACA TCAATGCCTC CCGGGCCCAT GCCGACCTGG AACCCGGGCC CGACGGCCGG 
CCCGCGGTCC GGCTGGGCCT GGACGAGGTG CGCACGATCG GCGACGAGCT GGCCGCCCGC 
ATCGTCGCCC GCCGCCCGAC CGAGGGGTAT CGCAGCCTGG ACGAGCTGAC CCGGACGGTG 
ACCCTGACCG CGCCGCAGGC CGAGGCGTTG GCCACCGCCG GGGCGCTGGA CACGCTGGTC 
GGCACCCGGC GACACGCGTT GTGGGCGGCC GGCGCCGCGG CCGGGGACCG GGCCGGCACC 
CTGGCCGGCA GCGTCGTCGG GCTGGACGCG CCCGCGCTGC CCGGAATGAG CGACATCGAG 
CTGACCGTCG CCGACATCTG GGCCACCGGC ATCTCGCCGC AGACCTACCC GACCGAGTTC 
TCCCGGGACC AGCTCGACGC CTGGGGGGTC AAGACCGCCG CCGCCCTCAA GGACACGGCG 
CACGGCACCC GGGTGCTGGT CGCCGGGGTG GTCACCCACC GGCAGCGCCC GGCCACCGCC 
TCCGGCGTCA TCTTCATCAA CCTGGAGGAC GAGACCGGGA TGCTCAACGT CATCTGCTCG 
GTCGGCCTGT GGGCCAAGTA CAAGCAAATC GCCCGCGGCT CACCGGCGCT GCTGGTGCGC 
GGGGTGGTCG AACGCGCCGG TGGGGCGATC TCGATCGTCG CCGACCGGAT CGCCCGGGTG 
AACCTGATCG CGGCCACCCC CTCCCGCGAC TTCCGCTGA 

 

Protein sequence

MGWTNPNVPW SELERALSGR PPAPGRGPLQ AIRHWQQDRP DPPPIPTGPP TAVPYAELHC 
HSAFSFLDGA STPEQLVAEA VRLGLEALAI TDHDGLYGIV RFAEAAREAG LRTLYGAELS 
LGLPEPQLGV PDPVGEHLLV LARGQEGYHR LSTQISRAQL AGGAKGRPVY DLDELADAAG 
GHWLILTGCR KGSVRRALQR HGPARAAEEL RALMDRFGRD NVVVELTTSL APTDDEDNDA 
LAALAAELDL PIVATTAAHY ATPAEGRIAA AMAAVRARRS LEEADPYLPA GPGSHLRSGA 
EMAALFARYP AAVPTAAAIG RECSFDLRLL APKLPPYDVP PGHDENSHLR QLTLAGAARR 
YGSPDDRPDA YAQIEKELGI IARLDFPGYF LIVNDIVDFC RRSDILCQGR GSAANSAVCY 
ALGITAVDAV RYELLFERFL APERDGPPDI DVDIESDRRE EVIQYVFATY GRDKAAQVAN 
VNTYRPRMAV RDMAKALGHS PGQQDAYSKQ LDGWVPLAGQ DASGIPADVL ALAHRIQDYP 
RHLSIHSGGM VICDRPVASV CPVEWARMEN RSVLQWDKDD CAAMGLVKFD LLGLGMLSAL 
HYAVDLIREH EGLEIDFAQL DLEEPAVYEM LQRADSVGVF QVESRAQMAT LPRLKPRTFY 
DLVVEVALIR PGPIQGNAVH PYIRRRNGQE EVTYDHPVME KSLAKTLGIP LFQEQLMQLA 
VDVAGFDAGE ADQLRRAMGA KRSKGKMEKL KARLYDGMRE RHGITGPVAD RIYERLLAFA 
NFGFAESHAL SFAALVFYSA WLKLHHPAAF CAALLRAQPM GFYSPQSLVA DARRHGVSIR 
RPDINASRAH ADLEPGPDGR PAVRLGLDEV RTIGDELAAR IVARRPTEGY RSLDELTRTV 
TLTAPQAEAL ATAGALDTLV GTRRHALWAA GAAAGDRAGT LAGSVVGLDA PALPGMSDIE 
LTVADIWATG ISPQTYPTEF SRDQLDAWGV KTAAALKDTA HGTRVLVAGV VTHRQRPATA 
SGVIFINLED ETGMLNVICS VGLWAKYKQI ARGSPALLVR GVVERAGGAI SIVADRIARV 
NLIAATPSRD FR