| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3147 |
|---|
| Symbol | |
|---|
| ID | 8448761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3463707 |
|---|
| End bp | 3466067 |
|---|
| Gene Length | 2361 bp |
|---|
| Protein Length | 786 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645042228 |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_003202469 |
|---|
| Protein GI | 258653313 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00573062 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0612355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAATT CGCCTGTGGG GATGGCGGGC GGTTTCGCGG AGTTGCGAGC CCAACTGCTG
AGCCGGACCG GGGTTCCCGG TCCGGCTCGG CGGAAGGCTC TCGCCCGGCT GACCGACGGC
TGGCTCGGCG AGCTGGCCCA GGACGCCGGG GTCAACGTCG GCGGCGTGGC CCTGGTCGCG
GTCGGCGGAT TCGGCCGCGG CGAACTGTCC CCCTTCTCGG ACCTGGATCT GGTCCTGTTG
CATTCCACGG AGACGCCGGC CTCCTACGCC GGCATGCTGG CCGAGCGGCT GTGGTACCCG
ATCTGGGACT CCAAGATCCG CCTGGATCAT TCGGTGCGCA GCGTCGGCGG AGCCCGGCAG
GTCGCCCGTA CCGACCTGCC GGCCATGCTG GGCATGCTCG ACCTGCGGCA CATCGCCGGT
GACCCGGACC TGGCCGTCAC CCTGCACCGC CGGGTGCTGG CCGACTGGCG CTCGGATGCC
AAGAACCGGC TGGCCGACCT GCGCGCGTCC TGCCAGGAAC GCGCCGACCG CTCGGGGCAG
CTGGCCTTCG CCACCACCCC CGATCTCAAG GAGTCCCGCG GCGGCCTGCG CGACCTGGTC
GTGATGCGCG CGGTGGCCGC CTCCTGGGTG GCCGACTGCC CGCACCAGGG ACTGGAGGAG
GCCCGCTCGG CGTTGCTGGA CGTGCGCGAC GTCGTGCAGA CCGTCGCCGG CCGGGCCACC
GACCGGCTGC AGGTGCAGGA CCAGGACGCG GTCGCCGCCC AGCTCGGGCT GGACGACCGG
GACGCCCTGC TCAAGCACGT CGCCGGCATC GCCCGCACCG TCGACCACGC CAGCGACCTG
ACCTGGCACC GGGTGGACCG GGCGCTGTCC CGGCCGTCGG GCACCATCAC CGACCTGGGC
GGCCGGATCA CCCGCCGCAT CGAACGCACC CCGCTGGCCG ACGGCATCGT CGAGCAGGAG
GGCGAGGCGG TGCTGGCCCG GGCGGTCAAC CCGGCCAACG ACCCCACGCT GGTGGTGCGG
GCGGCGGCCG CCGCTGCGCA GTCCGGGCTG CCGGTGTCGC CGGCCACCGT GCTGCGGCTG
GCCCGCACCT GCCCGCCGCT GCCCGACCCG TGGCCGCCGG TCGCGCTCGA TGCGTTCCTG
TCCCTGCTCG GAGCGGGCGA GCCGATGCTC GCCGCCTGGG AGGACCTGGA CCAGGCCGGT
TTGATCTCCA CCCTGCTGCC CGGCTGGGAG CGGCTGCGCT CGCTGCCGCA GCGCGACCCG
ATCCACCTCT ACACGGTCGA CCGGCACCTG ATGCAGACCG CGGTGAACGC CGCCGGCCTG
GTCCGCCGGG TGGCCCGACC GGACCTGCTG CTGCTGGCCG CGATCCTGCA CGACATCGGC
AAGGGACCCC GCGAGGACGA ACGCGACCAC GCCGACCACG CCGTGGTCGG GGCCGACCTG
TGCGTGCCCT GGCTGCGCCG GATGGGCCTG AGCGAGCCGG ACGTCCGGAC GGTCGAGCGG
CTGATCCGGC ACCACCTGCT GCTCGGCGAC TTCGCCGCCC GCCGCGACCC GGACGACCCG
GCCACCATCG CCGCGATCGT CGAGGCGGTC GGGGATGCGG CGACCCTGGA CCTGCTGGCG
GCGTTGACCG AGTCCGACGC CCGCGCGGCC GGCCCCGCGG CCTGGACCAC CTGGCGGGCC
GGGCAGATCC GGCACCTGGT CGGCCGGGTC CGCCGGGCCC TGGACGGGGA ACGCCCGGCC
GAGCCGCCGG CGATCACCCA GGTCGAGCGG GAACTGATCG AGTCCGGCAC CGGGTCGGTC
GGCATCGTCA TCGAGTCCAT CCCGGCCGCC GTGCGCATCA CCATCTGCGC GCCCGACCGG
CCCGGGCTGC TGGCCGCCGC CGCGGCGGTG CTGACCATGC ACCGGCTCAC CGTGCGTTCG
GCAGCGATCC GCACCATCGA CGGCCACGCG CTGCAGACCT GGATCGCCGC GCCTCAGTTC
GGCGAGGCCC CGGCCGCGGC CACCCTGCGA GCCGACCTGG TCCGGGCGCT GGACGGCAGC
CTGGACGTCG CGGCCCGGCT GGCCCGGCGC ACCGCCCCGC CCCGCCGCGG CCCCGCGGTG
CCGCCCGAGG TGCGGGTGGT GGAATCCGCC TCCGACCTGT CCACGGTGCT GGAGGTGCGG
GCGCACGACC TGCCCGGCCT GCTGTACACG GTGTCCTCGG CGCTGACCGC GGCCGGGGTC
AGCGTGGTCA GCGCCCGGGT GGACACGCTG GGCGCCGACG CCGTCGACGT GTTCTACGTG
CAGACGCCGG ACGGTGCCCC GCTGTCCGGG TCCCGGGCCC GCGAGGTCGC CGACGGCATC
ACCCAGGCGC TGGTCAGCTG A
|
|---|
| Protein sequence | MRNSPVGMAG GFAELRAQLL SRTGVPGPAR RKALARLTDG WLGELAQDAG VNVGGVALVA
VGGFGRGELS PFSDLDLVLL HSTETPASYA GMLAERLWYP IWDSKIRLDH SVRSVGGARQ
VARTDLPAML GMLDLRHIAG DPDLAVTLHR RVLADWRSDA KNRLADLRAS CQERADRSGQ
LAFATTPDLK ESRGGLRDLV VMRAVAASWV ADCPHQGLEE ARSALLDVRD VVQTVAGRAT
DRLQVQDQDA VAAQLGLDDR DALLKHVAGI ARTVDHASDL TWHRVDRALS RPSGTITDLG
GRITRRIERT PLADGIVEQE GEAVLARAVN PANDPTLVVR AAAAAAQSGL PVSPATVLRL
ARTCPPLPDP WPPVALDAFL SLLGAGEPML AAWEDLDQAG LISTLLPGWE RLRSLPQRDP
IHLYTVDRHL MQTAVNAAGL VRRVARPDLL LLAAILHDIG KGPREDERDH ADHAVVGADL
CVPWLRRMGL SEPDVRTVER LIRHHLLLGD FAARRDPDDP ATIAAIVEAV GDAATLDLLA
ALTESDARAA GPAAWTTWRA GQIRHLVGRV RRALDGERPA EPPAITQVER ELIESGTGSV
GIVIESIPAA VRITICAPDR PGLLAAAAAV LTMHRLTVRS AAIRTIDGHA LQTWIAAPQF
GEAPAAATLR ADLVRALDGS LDVAARLARR TAPPRRGPAV PPEVRVVESA SDLSTVLEVR
AHDLPGLLYT VSSALTAAGV SVVSARVDTL GADAVDVFYV QTPDGAPLSG SRAREVADGI
TQALVS
|
|---|
| |