Gene Namu_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3140 
Symbol 
ID8448754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3457178 
End bp3457987 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content72% 
IMG OID645042221 
ProductABC transporter related 
Protein accessionYP_003202462 
Protein GI258653306 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00364263 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0746509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CCACCACCCC GGCGCTGGCC GCGCGCGGCG TCACCCTGGC CTACGACCAG 
GCCGTGGTGT TCCGCGAGCT GGACCTGAGT ATCGAGCCGG GTCGGGTCAC CACCCTGATC
GGCGCGAACG GCAGCGGCAA GTCCACCCTG CTCAAGGCCT TCGGCCGGTT GCTGACCCCG
AGCGCCGGCG GCATCGAGCT GGACGGGGCA CCGGCGCGCT CGCTGCCGAC CCGGCAGATC
GCCCGGCGGC TGGCGATCCT GCCGCAGAAG CCGCTCACCC CGTCGGCGAC CAGCGTGCGG
GATCTGGTCT CGCGAGGCCG GCATCCGCAC CAGAGCCTGC TGCGGCCCTG GACCGAGCAG
GACGCGGCCG CGGTCGCCGA CGCGCTGGCC GCGACCGGGA TGACCGAGCT CGCCGATCGG
GACGCCGCCT CGCTGTCCGG CGGGCAGCTG CAGCGGGCCT GGATCGCGCT GGTGCTGGCC
CAACAGACGC CGATCATCCT GCTGGACGAG CCGACCACGT TCCTGGATCT GAGCCACCAG
CTCGATGTGC TGCACCTGAT CCGGTCGATC AACGCCGAGC GGGGCGCGAC GGTGGTGATG
GTGCTGCACG ACCTGTCGCT GGCCGGCCGG TTCTCCGACC GGCTGGTGGC CGTGGGCCGC
GGCCGGGTGC TGGCCGACGG ACCGCCGTGG GAGGTACTGA CCCCCACGGT GCTGCGGGAC
GCGTTCGACC TGGACGCGCG GGTGATCGCC GATCCCTGCA CCGGGTCGCC GCTGGTTGTG
CCTGAGGATA GGCTAACCTA CCTTTCGTGA
 
Protein sequence
MTVTTTPALA ARGVTLAYDQ AVVFRELDLS IEPGRVTTLI GANGSGKSTL LKAFGRLLTP 
SAGGIELDGA PARSLPTRQI ARRLAILPQK PLTPSATSVR DLVSRGRHPH QSLLRPWTEQ
DAAAVADALA ATGMTELADR DAASLSGGQL QRAWIALVLA QQTPIILLDE PTTFLDLSHQ
LDVLHLIRSI NAERGATVVM VLHDLSLAGR FSDRLVAVGR GRVLADGPPW EVLTPTVLRD
AFDLDARVIA DPCTGSPLVV PEDRLTYLS