Gene Namu_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3136 
Symbol 
ID8448750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3453715 
End bp3454149 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content71% 
IMG OID645042217 
Productribosomal protein S16 
Protein accessionYP_003202458 
Protein GI258653302 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0537506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.10713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCA AGATCAAGCT CGCTCGCTTC GGAAAGATCC GCGAGCCGCA CTACCGCATC 
GTCGTCGCCG ATTCGCGGAC CCGTCGCGCC GGCCGGACCA TCGAGAACAT CGGCCTGTAC
CAGCCGAAGT CCGAGCCCAG CCTCATCGAG GTCGACTCCG AGCGGGTCCA GTACTGGTTG
GGCGTCGGCG CGCAGCCGAC CGAGCCGGTG CTCGGCCTGC TCAAGGTGAC CGGCGACTGG
CAGAAGTTCA AGGGCCTGCC GGGCGCCGAG GGCACCCTCA AGCCGCAGCC GGTCAAGGCC
GACAAGCGCG CGCTGTACGA GGCGGCCATC GCGGCCATCG GCGGCGACGC GGACAACTCG
GCGACCACCC CGCGGCGCAA GGCCAAGGCG GCGGCCGACG AGGCCCCGGC GGCCGAGAGC
ACCGACGCGT CGTGA
 
Protein sequence
MAVKIKLARF GKIREPHYRI VVADSRTRRA GRTIENIGLY QPKSEPSLIE VDSERVQYWL 
GVGAQPTEPV LGLLKVTGDW QKFKGLPGAE GTLKPQPVKA DKRALYEAAI AAIGGDADNS
ATTPRRKAKA AADEAPAAES TDAS