| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3128 |
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| Symbol | |
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| ID | 8448742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3448689 |
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| End bp | 3449933 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 645042209 |
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| Product | cysteine desulfurase family protein |
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| Protein accession | YP_003202450 |
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| Protein GI | 258653294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000597393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0761383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA CCCCGATCGA TACCCCGATC GATACCCCGA TCGATACAGC AGCCCTGCGC
GCGCACTTTC CCGCCCTGGA GCTGGGCGTG GCCTACTTCG ACGGGCCCGG TGGCTCCCAG
GTGCCCGACG TGGTCGCCCG GGCGGTGGCC GGGACGCTGA CCGCCGGCGT GGCCAACCGG
GGCCGGGTGA CCGCGGCCGA GCGGGTGGCC GACGACACGG TGCTGGCCGC CCGGGCGGCG
ATGGCCGACC TGCTGGGCGC CGACCCCGAC GGCATCGTCT TCGGCCGCAG CATGACCGCG
CTGACCTTCG ACGTCGCCCG CACGCTGGCC GCCGGCTGGG CGCCCGGTGA CGAGATCGTG
GTGACCCGGC TGGACCACGA CGCGAACATC CGGCCGTGGC TGATCGCCGC GGACCGGGCC
GGGGTGAGCG TCCGCTGGGC CGAGTTCGAT CCGGCCACCG GCGAGCTGCC GGCCGAGGCG
GTGCAGGCGG TGATCACCCC ACGGACCCGG CTGGTGGCCG TCACCGCGGC CTCCAACCTG
CTCGGCACCC GGCCGGACGT CCCGGCCATC ACCCGGGCGG CGCATGAGGT CGGCGCGCTG
ACCTACGTCG ACGCCGTGCA CGCCGCCGCG CACGTTCCGC TCGACGCGGT CGCCCTGGGC
GCCGACCTGC TGGTCTGCTC GCCGTACAAG TTCCTGGGGC CGCACTGCGG GGTGCTGGCC
GGCCGGGTCG ACCTGCTCCA GACGCTGCAC CCGGACAAGC TGCTGCCCTC CTCCGACGCG
GTACCCGAAC GCTGCGAGCT GGGCACCCTG CCGTACGAGC TGCTGGCCGG CACCACCGCC
GCGGTGGACT TCCTGGCCAC GTTGGCCGGC CAGGCGCACC GGGTGGCCGG CGACCGCCGC
CAGCAGTTGG TCGCGGCGTT GACAGCGGTG GACGAGCACG AGCAGCGGCT GCGCCGGCGC
ATCGAGGCCG GGCTGGCCGA ACTGCCGGGC GTGACCGTGC ACTCGCGGGC GGCCCGGCGC
ACCCCGACCC TGCTGCTGAC CTTCGCCGAG CACGCCCCGA CGGCGGCGTA CCACTTCCTG
GCCGAACGCG GGATCAACGC GCCGGCCGGC TCGTTCTACG CGATCGAGGC GTCCCGGGCG
CTGGGCCTGG GTGACGGCGG CGGGTTGCGG GTGGGGTTGG CGCCGTACGT GGACGACGAC
GACGTGGACC GGCTGCTGGC CGGACTGGCA GAGTTCCTGT CGTGA
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| Protein sequence | MTETPIDTPI DTPIDTAALR AHFPALELGV AYFDGPGGSQ VPDVVARAVA GTLTAGVANR
GRVTAAERVA DDTVLAARAA MADLLGADPD GIVFGRSMTA LTFDVARTLA AGWAPGDEIV
VTRLDHDANI RPWLIAADRA GVSVRWAEFD PATGELPAEA VQAVITPRTR LVAVTAASNL
LGTRPDVPAI TRAAHEVGAL TYVDAVHAAA HVPLDAVALG ADLLVCSPYK FLGPHCGVLA
GRVDLLQTLH PDKLLPSSDA VPERCELGTL PYELLAGTTA AVDFLATLAG QAHRVAGDRR
QQLVAALTAV DEHEQRLRRR IEAGLAELPG VTVHSRAARR TPTLLLTFAE HAPTAAYHFL
AERGINAPAG SFYAIEASRA LGLGDGGGLR VGLAPYVDDD DVDRLLAGLA EFLS
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