Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3127 |
Symbol | |
ID | 8448741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3448192 |
End bp | 3448692 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645042208 |
Product | dual specificity protein phosphatase |
Protein accession | YP_003202449 |
Protein GI | 258653293 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000368556 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.033409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATCG ACCCGTCCCG CATCGAGATC GCGTTCGACC CGCGGCGGCA GCGAATGGCC GGGATCTCGG CGCACGGGCT GATGTCCTTC GACGTGCCGT TCATCAGCGA GATCACCGAC AACCTGTGGC TCGGCGGCTG CGAGGACGGT CTGGTGCTGC CCGAGTTCAT CGGGCACCTG GTCTCGCTCT ATCCGTGGGA GCAGTACACG GTCAAGCACG ACCTGGACTC GCGGCTCGAG GTCCGGATGT ACGACCAGAC CAATCAGGCG ATGGATCAGG TGGACGCGAT CGCCTCCTGG GTGAACACCT GCCGGCGCGG CGCCCCGACC CTGGTGCACT GCCAGGCCGG GCTCAACCGG TCCAGCCTGG TCGCGGCGCG GGCCCTGGTG CTCGAGGGGA TGAGCGCTGA TGAGGCGATC ACCCTGATCC GGGAGAAGCG CTCGCCCGCC TGCCTGTGCA ATCCGGCCTT CGAACGCTGG CTGCGGGAGC CGCCGGCCTA A
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Protein sequence | MSIDPSRIEI AFDPRRQRMA GISAHGLMSF DVPFISEITD NLWLGGCEDG LVLPEFIGHL VSLYPWEQYT VKHDLDSRLE VRMYDQTNQA MDQVDAIASW VNTCRRGAPT LVHCQAGLNR SSLVAARALV LEGMSADEAI TLIREKRSPA CLCNPAFERW LREPPA
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