Gene Namu_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3127 
Symbol 
ID8448741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3448192 
End bp3448692 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content68% 
IMG OID645042208 
Productdual specificity protein phosphatase 
Protein accessionYP_003202449 
Protein GI258653293 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000368556 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.033409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCG ACCCGTCCCG CATCGAGATC GCGTTCGACC CGCGGCGGCA GCGAATGGCC 
GGGATCTCGG CGCACGGGCT GATGTCCTTC GACGTGCCGT TCATCAGCGA GATCACCGAC
AACCTGTGGC TCGGCGGCTG CGAGGACGGT CTGGTGCTGC CCGAGTTCAT CGGGCACCTG
GTCTCGCTCT ATCCGTGGGA GCAGTACACG GTCAAGCACG ACCTGGACTC GCGGCTCGAG
GTCCGGATGT ACGACCAGAC CAATCAGGCG ATGGATCAGG TGGACGCGAT CGCCTCCTGG
GTGAACACCT GCCGGCGCGG CGCCCCGACC CTGGTGCACT GCCAGGCCGG GCTCAACCGG
TCCAGCCTGG TCGCGGCGCG GGCCCTGGTG CTCGAGGGGA TGAGCGCTGA TGAGGCGATC
ACCCTGATCC GGGAGAAGCG CTCGCCCGCC TGCCTGTGCA ATCCGGCCTT CGAACGCTGG
CTGCGGGAGC CGCCGGCCTA A
 
Protein sequence
MSIDPSRIEI AFDPRRQRMA GISAHGLMSF DVPFISEITD NLWLGGCEDG LVLPEFIGHL 
VSLYPWEQYT VKHDLDSRLE VRMYDQTNQA MDQVDAIASW VNTCRRGAPT LVHCQAGLNR
SSLVAARALV LEGMSADEAI TLIREKRSPA CLCNPAFERW LREPPA