| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3118 |
|---|
| Symbol | |
|---|
| ID | 8448732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3438426 |
|---|
| End bp | 3440210 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645042199 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202440 |
|---|
| Protein GI | 258653284 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.092965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.169209 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTCC TCAATCGCAA GACCCTGCTG CCCGTGGTGC TGTCCCTGGC CCTGGTCACC
GGCGCCTGCT CGACCGCCGC AACCACGGCC GGCACCACCT CGAGCACCGC ATCGAGCACC
GCGTCGAGCA CCGCCGGCAG CACGACCTCG AGCGCCGCCC AGACGCTGGC CGAGAACGCC
GCCGTCGAGC CGGTGGCCGA CACCTCCGGG CAGACCCAGG AGACGATCAC CCTGTCCGGG
ACGGGCGCCA GCAGCAGCTC CGCCGCGGTC ACCGTGGCCG AGGGCACGGT CACCATCACC
GCGGCCGGGA CCTACCGGAT CAGCGGCACC CTGACCGACG GCCAGCTGGT CGTCGAGGTG
CCCGGCGACG GCGTGGTCAC CCTGATCCTG GACGGCGCCG AGATCACCAG CTCGACCGGT
CCCGCGCTGC TGGTCAGCGA CGCCCAGTCC GTGGTGGTGC AGCTGGCCGA CGGCACCCAG
AACACCCTGT CCGACGCCAG CACCTATGCC CAGACCGGCA CCAGCACCGA CACCGACACC
CCGAACGCGG CCCTGTACAG CACGGCCGAC CTGACCATCA CCGGAGGCGG CGCGTTGACG
GTGCACGGCA ACGCCGCCGA CGGCATCACC AGCAAGGACG GGCTGGCCAT CACCGCCGGC
ACGATCGCGG TGAGCGCGGT CGACGACGGT ATCCGCGGCA AGGATTACCT GGTGGTCTCC
GGCGGCACGG TCACCGTGAC CGCCGGCGGC GACGGCCTCA AGTCCGACAA CGACGAGGAC
GCCACCAAGG GCTACATCGC GGTCGAGGGC GGCTCGCTCA CCGTGACCGC GGCCGGGGAC
GGCCTGGATG CGGTCACCGA CGTGGTGGTC TCCGCCGGCA CCCTGGCCGT GACCGCGGGC
GGCGGCCACT CGGCCGGCGT CGCCGACGAC ACCTCGGCCA AGGGCCTCAA GGGCGCGGTC
AGTGTGGTGG TGGACGGCGG CACCGTCACC GTCGACGCCG CCGACGACGC CGTGCATGCC
AACGGGTCGG TCACCGTCAA CGGCGGCACG CTGAGCCTGG CCTCCGGTGA CGACGGCGTG
CACGCCGACG GGGAGGTGGC CATCGCCGGC GGCACGCTGG GCGTCACCGA GTCCTACGAG
GGCATCGAGG GCGCGACCAT CACCATCTCG GCCGGCGAGA CAACGGTGAC CAGCGCGGAC
GACGGCATCA ACGCCGGCTC GCAGCTGACC ATCGGCGGCG GGACCATCGT GGTCGACGCC
GACGGCGACG GCCTGGACTC CAACGGGTCG ATCGCCATCA GCGGCGGCAC CACCGTGGTC
AACGGACCGA CCGAGAACAT GAACGGGGCG CTGGACACCG ACGGCAGCTT CACCATCACC
GGCGGCGTGC TGCTGGCCGC GGGCAGTTCC GGCATGGCCG AGGCACCGGA CGCCTCGTCC
GCGCAGGGTT GGGTCGCGGT GTCCTTCAGC GCGGCGCAAC CGGCCGGCAC GGTGGTGCAC
ATCGCCGCCG CGGACGGCAC CGTGCTGGCC TCGTTCACGG CCAGCAAGGC GTTCTCGTCG
CTGGTCTACT CCTCGGCCCA GATCACCAGC GGGGCCAGCT ACACGGCCTT CACCGGCGGA
TCGGTCCAGG GCGAGTCGAT CGGCGGTCTG ACCACCGGCG GCGGCATCGA CGGTGCGACC
TCGGTCGGCA CCTTCACCGC CGGCCAGGCC CCGGCCGGGG GCATGGGCGG GATGGGCGGC
GGGATGGGCA GCGGAATGCC CGGCGGGCAG CGGCCGGGCG GCTGA
|
|---|
| Protein sequence | MKFLNRKTLL PVVLSLALVT GACSTAATTA GTTSSTASST ASSTAGSTTS SAAQTLAENA
AVEPVADTSG QTQETITLSG TGASSSSAAV TVAEGTVTIT AAGTYRISGT LTDGQLVVEV
PGDGVVTLIL DGAEITSSTG PALLVSDAQS VVVQLADGTQ NTLSDASTYA QTGTSTDTDT
PNAALYSTAD LTITGGGALT VHGNAADGIT SKDGLAITAG TIAVSAVDDG IRGKDYLVVS
GGTVTVTAGG DGLKSDNDED ATKGYIAVEG GSLTVTAAGD GLDAVTDVVV SAGTLAVTAG
GGHSAGVADD TSAKGLKGAV SVVVDGGTVT VDAADDAVHA NGSVTVNGGT LSLASGDDGV
HADGEVAIAG GTLGVTESYE GIEGATITIS AGETTVTSAD DGINAGSQLT IGGGTIVVDA
DGDGLDSNGS IAISGGTTVV NGPTENMNGA LDTDGSFTIT GGVLLAAGSS GMAEAPDASS
AQGWVAVSFS AAQPAGTVVH IAAADGTVLA SFTASKAFSS LVYSSAQITS GASYTAFTGG
SVQGESIGGL TTGGGIDGAT SVGTFTAGQA PAGGMGGMGG GMGSGMPGGQ RPGG
|
|---|
| |