Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3115 |
Symbol | |
ID | 8448729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3435931 |
End bp | 3436941 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645042196 |
Product | integrase family protein |
Protein accession | YP_003202437 |
Protein GI | 258653281 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0082342 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.151412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCGCA CCTCGACCGC CGAGCTCCGG GACGGGTTGC CCGCGCCGTT GGTCCGCGAT CTCGAGCGCT ACCGGACGTT CCTGTCGGCC GAACGCAACC GGTCGCCCGC CACCGTCACC GCCTACCTGG CCGACCTGGT CTCGCTGCTG GACCACCTGG GCCGGATGAC CGGGGACCGG CCGGCGGAGC TGACCGACCT CACCCTGCCG GTGCTGCGCA GCTGGCTGGC CCGGCAGCGG ACCACCGGCG CCGCCCGCGC GACGCTGGCC CGGCGGGCCG CCGCGGCCCG CTCGTTCTGC GCCTGGGCCC ATCGCACCGG CCGGCTGCCG CAGGACGTCG GCGCCCGGCT GGCCGCGCCG CGGGCGGACA AGACGCTGCC GGCGGTGCTG CGCGCCGATC AGGCCCACCA GATGCTCGAC GCTCCGGCGG TCTCCGCCCC GGACCAGTCG CCGGACACCG GCACCGGCAC CGGCACTGGC ACTGGCACCA GCGCCGTCGA GCAGGCCATG GCCCGGCGCG ACCAGGCGAT CCTGGAACTG CTCTACGCCT CCGGGATCCG GGTGTCCGAG CTGACCGGGC TGAACCTGGA CGCGATCGAT CGGCACCGAC GGGTCATCCG GGTGCTGGGC AAGGGCAACA AGCAGCGGAC CGTGCCATTC GGGCTGCCCG CCGACCGGGC CCTGGGGGAC TGGCTGGATC GGGGGCGACC GGTGCTGGCC GACGACGAGT CGGGCGCCGC GGTGTTCCTG GGCCGGCGGG GCCGGCGGAT CGACCCGCGG GCGGTGCGCA CCCTCGTGCA CCGGCGCACC GCCGCCGTCG ACGGGGCTCC GGAGATCGCC CCGCACGGCC TGCGGCACAC CGCGGCCACC CACCTGCTGG AGGGCGGCGC GGACCTGCGG ACCGTGCAGG AGCTGCTCGG CCACGCCAGC CTGGCCACCA CGCAGATCTA CACCCACGTG TCCACCGAGC GGCTGGCCGC GATCTACCGG CAGGCTCATC CGCGGGCGTG A
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Protein sequence | MVRTSTAELR DGLPAPLVRD LERYRTFLSA ERNRSPATVT AYLADLVSLL DHLGRMTGDR PAELTDLTLP VLRSWLARQR TTGAARATLA RRAAAARSFC AWAHRTGRLP QDVGARLAAP RADKTLPAVL RADQAHQMLD APAVSAPDQS PDTGTGTGTG TGTSAVEQAM ARRDQAILEL LYASGIRVSE LTGLNLDAID RHRRVIRVLG KGNKQRTVPF GLPADRALGD WLDRGRPVLA DDESGAAVFL GRRGRRIDPR AVRTLVHRRT AAVDGAPEIA PHGLRHTAAT HLLEGGADLR TVQELLGHAS LATTQIYTHV STERLAAIYR QAHPRA
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