Gene Namu_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3112 
Symbol 
ID8448726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3433190 
End bp3434014 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content70% 
IMG OID645042193 
Producttranslation elongation factor Ts 
Protein accessionYP_003202434 
Protein GI258653278 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000959082 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0226218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA GCGCGGCTGA TGTCAAGCGG CTCCGGGAGC TCACCGGCGC CGGCATGATG 
GACTGCAAGA AGGCTCTGGA GGAGTCCGAC GGCGACTTCG ACAAGGCTGT CGAATTCCTG
CGCATCAAGG GTGCGAAGGA CATCGGCAAG CGGGCCGAGC GCACGACGGC CAACGGCCTG
GTGGCCGCGG TCGGCGGCGC GCTGATCGAG CTCGACTGCG AGACCGACTT CGTCGCCAAG
AACGCCGAGT TCCAGGACCT GGGGGAGCGG ATCGTCAACG TCGCCGCCAC CCTGGACGCC
GGCATCACCG TCGACGCCGT CCTGGCCGCC GCGCTGGGCA CCGGCACGGT CGAGGACGAG
ATCAACGCGC TCTCGGCCAA GATGGGCGAG AAGGTCGAGC TGCGCCGCGT CGTCAAGTAC
GACGGCGCCA CCACCGTCTA CCTGCACAAG CGGTCGGCCG ACCTGCCGCC GGCCATCGGC
GTGCTGGTCG CCTACGAAGG CTCGTCGGAG GAGGCCGCGG AGGCCGCCCG GGGTGCCGCG
ATGCAGATCG CCTCGCTCAA GGCCCGCTAC GTCTCCCGCG ACGCCATCCC GGCCGACGTG
ATCGACAGCG AGCGGCGCAT CGCCGAGGCC ACCGCCCGCG AGGAGGGCAA GCCGGAGGCG
GCCCTGCCCA AGATCGTCGA GGGTCGGGTC AACGGCTTCT TCAAGGAGGC CGTGCTCACC
GAGCAGGCGT CCGTGCTGGA CTCCAAGAAG ACCGTCGGAG CGCTGCTGTC CGCGGCCGGG
GTCACGGTGA CCGCGTTCAC CCGCTTCGAG GTCGGCACCG CCTGA
 
Protein sequence
MAISAADVKR LRELTGAGMM DCKKALEESD GDFDKAVEFL RIKGAKDIGK RAERTTANGL 
VAAVGGALIE LDCETDFVAK NAEFQDLGER IVNVAATLDA GITVDAVLAA ALGTGTVEDE
INALSAKMGE KVELRRVVKY DGATTVYLHK RSADLPPAIG VLVAYEGSSE EAAEAARGAA
MQIASLKARY VSRDAIPADV IDSERRIAEA TAREEGKPEA ALPKIVEGRV NGFFKEAVLT
EQASVLDSKK TVGALLSAAG VTVTAFTRFE VGTA