Gene Namu_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3110 
Symbol 
ID8448724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3431863 
End bp3432420 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID645042191 
Productribosome recycling factor 
Protein accessionYP_003202432 
Protein GI258653276 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000193761 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00426294 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGACG AGGAACTCTT CGACGCCGAA GAGAAGATGG AGAAGGCGGT GAGCGTGGCC 
AAGGACGACC TGGCCACGCT CCGCACCGGC CGGGCCAACC CCAATATGTT CGGCCGCATC
CAGGTCGACT ACTACGGCGC GCCGACGCCG ATCACCCAGA TGGCGGCGAT CAACATCCCG
GAGGCGCGGA TGGCGGTCAT CAAGCCGTAC GACTCCAGCC AGCTGCACGC CGTCGAGAAG
GCGATCCGGG ACTCGGACCT GGGCGTCAAC CCGACCACCG ACGGCATCGT CATCCGCGTC
GTGTTCCCGC AGCTCACCGA GCAGCGGCGG CGCGAACTGG GCAAGACCGC CCGGTCCAAG
GGCGAGGACG CCAAGGTCTC GATCCGCAAC ATCCGGCGCA AGTGCACGCA GGTGCTGGAC
AAGCTGGTCA AGGACGGCGA GGTCGGCGAG GACGACGTCA CCCGCGCCGA GAAGGAACTG
CAGCAGATCA CCGACCGCTA CACCAGCCAG GTGGATGAGA TGGTCAAGCA CAAGGAAGCC
GAGCTGCTCG AAGTCTGA
 
Protein sequence
MIDEELFDAE EKMEKAVSVA KDDLATLRTG RANPNMFGRI QVDYYGAPTP ITQMAAINIP 
EARMAVIKPY DSSQLHAVEK AIRDSDLGVN PTTDGIVIRV VFPQLTEQRR RELGKTARSK
GEDAKVSIRN IRRKCTQVLD KLVKDGEVGE DDVTRAEKEL QQITDRYTSQ VDEMVKHKEA
ELLEV