Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3110 |
Symbol | |
ID | 8448724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3431863 |
End bp | 3432420 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645042191 |
Product | ribosome recycling factor |
Protein accession | YP_003202432 |
Protein GI | 258653276 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000000193761 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00426294 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGACG AGGAACTCTT CGACGCCGAA GAGAAGATGG AGAAGGCGGT GAGCGTGGCC AAGGACGACC TGGCCACGCT CCGCACCGGC CGGGCCAACC CCAATATGTT CGGCCGCATC CAGGTCGACT ACTACGGCGC GCCGACGCCG ATCACCCAGA TGGCGGCGAT CAACATCCCG GAGGCGCGGA TGGCGGTCAT CAAGCCGTAC GACTCCAGCC AGCTGCACGC CGTCGAGAAG GCGATCCGGG ACTCGGACCT GGGCGTCAAC CCGACCACCG ACGGCATCGT CATCCGCGTC GTGTTCCCGC AGCTCACCGA GCAGCGGCGG CGCGAACTGG GCAAGACCGC CCGGTCCAAG GGCGAGGACG CCAAGGTCTC GATCCGCAAC ATCCGGCGCA AGTGCACGCA GGTGCTGGAC AAGCTGGTCA AGGACGGCGA GGTCGGCGAG GACGACGTCA CCCGCGCCGA GAAGGAACTG CAGCAGATCA CCGACCGCTA CACCAGCCAG GTGGATGAGA TGGTCAAGCA CAAGGAAGCC GAGCTGCTCG AAGTCTGA
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Protein sequence | MIDEELFDAE EKMEKAVSVA KDDLATLRTG RANPNMFGRI QVDYYGAPTP ITQMAAINIP EARMAVIKPY DSSQLHAVEK AIRDSDLGVN PTTDGIVIRV VFPQLTEQRR RELGKTARSK GEDAKVSIRN IRRKCTQVLD KLVKDGEVGE DDVTRAEKEL QQITDRYTSQ VDEMVKHKEA ELLEV
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