| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3075 |
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| Symbol | |
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| ID | 8448689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3391379 |
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| End bp | 3392650 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645042157 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_003202398 |
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| Protein GI | 258653242 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000212067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000123729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGTGC CCGCGCGAGC GGCCGTCGAT CTGCCACGCC CGTCCGACGG GCTGGCCGGC
ACCGACCACG ATCCCGACGA CCGCGGCTAC TTCGGCACCA TGGGCGGCCG GTGGTTGCCC
GAGGCCCTGG TCGGGGCCCT GGACGAGGTC GCCGACTACT ACCGCAAGGC CCGCCGGGAC
CCCGATTTCC TGGCCCGGCT GGACGACCTG GCGGCCAACT ACGCCGGCCG CCCGAGCCCG
CTGTCCGACG CCCCCCGGCT GACCGCCGAG GTCGGCGGCG CTCGGATCCT GCTCAAGCGC
GAGGACCTGA ACCACACCGG CAGCCACAAG ATCAACAACG TGCTCGGGCA GGCCTTGCTG
GCCCAGCGCA TGGGCAAGAC CCGGCTGATC GCCGAGACCG GGGCCGGCCA GCACGGGGTG
GCCACCGCCA CCGCCGCGGC CCTGCTCGGC CTGGAGTGCT GCATCTACAT GGGCCGGGTC
GACACCGAAC GGCAGGCCCT GAACGTGGCC CGGATGCGGC TGCTGGGCGC CGAGGTCGTC
GCCGTCGAGG CCGGCTCGGC CACCCTCAAG GACGCCATCA ACGAGGCGTT CCGGGACTGG
GTGGCCACCG TCGACCACAC CTTCTACCTG TTCGGCACGG TGGCCGGCCC GCATCCGTTC
CCGGTGATCG TCCGCGACTT CCAGCGGATC ATCGGCCTGG AGGCCCGGGC CCAGGTGCTC
GACCGCACCG GCCGGTTGCC CGACGCGGTC GCCGCCTGCG TCGGCGGCGG CTCCAACGCG
ATGGGCATCT TCCACGCCTT CCTGGACGAC CCGGACGTGC GGCTGGTCGG CCTGGAGGCC
GGCGGCGACG GCATCGAGAC CGGACGGCAC GCCTCCACCA TCAGCGGCGG CTCGGTCGGG
GTGCTGCACG GCGCCCGCTC CTTCCTGCTG CAGGACGCCG ACGGCCAGAT CATCGAGTCG
CACTCGATCA GCGCCGGACT GGACTACCCC GGCGTCGGCC CCGAGCACTC GCACCTGGCC
GAGATCGGCC GGGCCGAGTA CCGCTCGATC ACCGACACCC AGGCCATGGA TGCGTTCGCG
CTGCTGGCCC GGACCGAGGG CATCATCCCG GCCATCGAGT CCGCGCACGC CGTGGCCGGG
GCGCTGGACC TGGCCCGGGA GATCGGCCCC GAGGGCATCG TGTTGATCAA CGTCTCCGGC
CGGGGGGACA AGGACATGGA GACGGCCATG CAGTGGTTCA AGCTGGCCGA ACCGACGGGA
GCCGTCCAGT GA
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| Protein sequence | MSVPARAAVD LPRPSDGLAG TDHDPDDRGY FGTMGGRWLP EALVGALDEV ADYYRKARRD
PDFLARLDDL AANYAGRPSP LSDAPRLTAE VGGARILLKR EDLNHTGSHK INNVLGQALL
AQRMGKTRLI AETGAGQHGV ATATAAALLG LECCIYMGRV DTERQALNVA RMRLLGAEVV
AVEAGSATLK DAINEAFRDW VATVDHTFYL FGTVAGPHPF PVIVRDFQRI IGLEARAQVL
DRTGRLPDAV AACVGGGSNA MGIFHAFLDD PDVRLVGLEA GGDGIETGRH ASTISGGSVG
VLHGARSFLL QDADGQIIES HSISAGLDYP GVGPEHSHLA EIGRAEYRSI TDTQAMDAFA
LLARTEGIIP AIESAHAVAG ALDLAREIGP EGIVLINVSG RGDKDMETAM QWFKLAEPTG
AVQ
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