| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3055 |
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| Symbol | |
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| ID | 8448668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3365254 |
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| End bp | 3368010 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645042138 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_003202380 |
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| Protein GI | 258653224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.107976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000610459 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCTGT GGCGGCACCT GAGCGACACC GCTGAAGTCG CCGGCCTGCT GTGGGACCGA
TGGATGGCAC CGTCCGTCCG TCGGATCATC GCCGATGGAA GACCGGACGA CGTCGCGCGG
ACCGTGCTCG TCTGGCTGGC CGGCTCGCAC GATCTGGGCA AGGCCAGCCC GGCATTCGCT
GCCCAAGTTC GTCCACTCAC GGAGCCGATG CGCGACGCGG GTCTTCCGTT CAGCCCGTTG
GTGGAGCATC CGCCAAGGAC GCCGCATGCT CAGCAGTCCC ACCGGATTCT GCGACAGTGG
TTGGAGAGCA ATGGGTTCGA TCGGGACACG GCTGACTCAT GGGCCATTGT GCCCGGTGGT
CATCATGGCG TCGCGCCGGG CCGGGACGAC ATCACGCACG CGGGTGTGGC GGCCCAGGCC
GGCACCGGGC CATGGCGCGG CGTCCAGCAG GAGCTGACTG ACTGGGTAGC CCGGAACTCC
GGCATCACCG CGCATCTGGA TTCGCTCCGC ACCGCAGCGC TCGCGCCGAC GGCACAGGTG
GTGATCACGG CGGTGGTGAT CGTTGCCGAC TGGATCGCCA GCGACACCGC TCGGTTCCCC
TGTTTCGATA CCAGGTCGAC GGCAGAGCGA GTTCGGAGCG GTTGGCGCGA CGTCGGCCTT
CTCCCCGCCT GGTCGGCCGA TGCGGGAGCG GTGGAGACGC TGTTCGGACG TCGCTTCGGC
CGGGAGGCGA GACCGGCGCA AGAAGAGGCC ATCCGCGCCG CCCAGGCGAT CACGGGTCCT
GGTCTGATGA TCATCGAGGC GCCGATGGGG GAGGGCAAGA CGGAGGCGGC GCTGGCCGCC
GGTGAGGTGC TCGCTGAACG GTTCGGCTGC GGCGGACTGA TCTTTGCGCT GCCGACGATG
GCCACTTCCG ATGCGATGGT CGACCGGTTC ACCGGGTGGC TTCGCGGTGC TGCGCAGTCG
GCACAGCCCT TCTTCCTCGC CCACAGCAAG GCACCCCTGA ACCCGACATT CGCCGCCATG
CGCACGCTGT CGCCCACGAC GGGGGATGGC GGGGTCGATG GATGCGGAGC CGGGGTGGCA
GTTGCGCTTG AGTGGCTGAC CGGACGCAAG AAGGGCATGC TGGCGAACTT CGTGATCGGG
ACGATCGACC AGGTCTTGTA TGCAGCCTTG CGTGGCCGTC ACGTGGCGTT GCGGCACCTG
GCCCTGGCCG GGAAGGTCGT CGTCATCGAC GAGGTCCACG CCGCCGATGT GTACATGGCA
GTCTTCCTGC GGGATGTCCT GCGTTGGCTC GGTGCCTACG GTGTCCCGGT CATCCTGCTG
AGCGCCACCC TGCCAGCGGC TCGCCGGCAG GAACTTCTGA ACGCCTACAG CACCGGGGCC
CGGCCGGCGA CGCCAGCCTC CCCGACGGCT CGGGCTTCTC GACGCCGTCG GCCGCGGGCA
CTCACGTCGG CTGGCCCGCC ACCCCCATCC TGCGACGAGG CGACAGCATC TGGTGAAGGC
CTGGCGGGGG CGGGCCCTTT GCCGTACCCC CTGATCACGA TCGCCGGGGC CGGCAGCATG
GTTCAGGTGG CGCCGGCGGC AGCCGGGCTG GCCCGCACGG TGCGGGTCGA ATTCGCCTCC
GACGACGAGT CCGAGCTGGT CGACCTCGTC CGCGCAGCTT CCCAGGGCGG CGGAGTTGTC
GGGATCATCC GGAACACCGT CGGGCGTGCC CAGCGCTCGG CCGCGGTCCT TCGGGCGGAA
TTGGGTGAGG AGGTGGTGAC GTTAACGCAC TCGCGTTACC TGGCCACGGA TCGGATGCGC
AGGGACCGTG ACCTGCTTGC CGAGCTGGGG GCTCCCGGCC AGGCCCGCCG GATGCCCGGC
CCTCGTATCG TGGTCGGCAC CCAGGTACTC GAGCAATCCC TCGATATCGA CTTCGATCTG
TTGGTCACCG ATCTGGCCCC GGCTGACCTG ATCCTGCAGC GAATGGGTCG CTTGCACCGC
CATCGACGCC ACGCTCACGA GCGAGGATTA ATGACCAAGC CCCGGTGCGT CGTGGTCGGG
GCGAATTGGG ATGCCGACCC CGTCGAACCT GATCGTGGAT CGGTGGCAGT TTATGGATTG
GCAGCCCTGT TGCGGGCTGC GGTCGTCCTC AGATCGGACG GATCGCCAGG CAGGGATATT
GAGCTTCCAG CGGATATCCC GCGGCTGGTC GATCAGGCCT ACGCCGCGGA GGTCGAGGTA
CCCGAAGCGT GGTGCGCGAC CTTCGATGAC GCCGAACAGA AGGCTCAGCA GGAGAGCGCC
GGTCGCACCA CTGGGGCCGA GATGTTCAGC ATCGGGAAGG TCCCGGTGCT GGACCTGTTC
GGCTGGTCGC ATGCCAATGC CGGTGACGCG GAGGGACACG ATGGTCGGGC GAAGGTGCGG
GACGGCGAGG ACGGGTTGGA GGTGCTTGTC GTCCAACAGC GGGGTGACGG CTGGTTCGTG
CTTCCCTGGT TGAGCGATTG CGGCGGTGCG GAATTGCCCC GGGACGCAGC CCCGGAACCG
CGGCTGGCTC GGGCCGTGGC TCAATGCTCG TTGCGGCTAC CCCGACAGCT GTCGGTCTGG
CGAATTGACC AGGTCATCGG CGAACTTGAA CGCCAAGGTC GGGCGTCCTG GCAGCAATCT
CCCTGGGTGC GCGGAGAGTT GGTCCTGCCG CTGAGTGAGG ACCTGACCGC GGAGCTTGCT
GGATTCCGGC TGCGCTACTC ACGTCGGGAC GGGCTCGTCG TCGAGGAGGC AGAATGA
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| Protein sequence | MPLWRHLSDT AEVAGLLWDR WMAPSVRRII ADGRPDDVAR TVLVWLAGSH DLGKASPAFA
AQVRPLTEPM RDAGLPFSPL VEHPPRTPHA QQSHRILRQW LESNGFDRDT ADSWAIVPGG
HHGVAPGRDD ITHAGVAAQA GTGPWRGVQQ ELTDWVARNS GITAHLDSLR TAALAPTAQV
VITAVVIVAD WIASDTARFP CFDTRSTAER VRSGWRDVGL LPAWSADAGA VETLFGRRFG
REARPAQEEA IRAAQAITGP GLMIIEAPMG EGKTEAALAA GEVLAERFGC GGLIFALPTM
ATSDAMVDRF TGWLRGAAQS AQPFFLAHSK APLNPTFAAM RTLSPTTGDG GVDGCGAGVA
VALEWLTGRK KGMLANFVIG TIDQVLYAAL RGRHVALRHL ALAGKVVVID EVHAADVYMA
VFLRDVLRWL GAYGVPVILL SATLPAARRQ ELLNAYSTGA RPATPASPTA RASRRRRPRA
LTSAGPPPPS CDEATASGEG LAGAGPLPYP LITIAGAGSM VQVAPAAAGL ARTVRVEFAS
DDESELVDLV RAASQGGGVV GIIRNTVGRA QRSAAVLRAE LGEEVVTLTH SRYLATDRMR
RDRDLLAELG APGQARRMPG PRIVVGTQVL EQSLDIDFDL LVTDLAPADL ILQRMGRLHR
HRRHAHERGL MTKPRCVVVG ANWDADPVEP DRGSVAVYGL AALLRAAVVL RSDGSPGRDI
ELPADIPRLV DQAYAAEVEV PEAWCATFDD AEQKAQQESA GRTTGAEMFS IGKVPVLDLF
GWSHANAGDA EGHDGRAKVR DGEDGLEVLV VQQRGDGWFV LPWLSDCGGA ELPRDAAPEP
RLARAVAQCS LRLPRQLSVW RIDQVIGELE RQGRASWQQS PWVRGELVLP LSEDLTAELA
GFRLRYSRRD GLVVEEAE
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