| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3052 |
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| Symbol | |
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| ID | 8448665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3361605 |
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| End bp | 3362741 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645042135 |
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| Product | CRISPR-associated protein, Cse4 family |
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| Protein accession | YP_003202377 |
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| Protein GI | 258653221 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000809112 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00221304 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTGCA TCGACATCCA CATCCTGCAG ACCGTCCCGC CGAGCAACCT CAACCGTGAC
GACACCGGCA GCCCGAAGAC GGCAATCTAC GGCGGCGTTC AGCGCGCCCG CGTGTCGAGC
CAGGCATGGA AACGGGCTAC CCGCAAGGCA TTCGATGGTC GAATCAAGCC GGCGGACCTC
GGGGTGCGCA CCAAACGGGT CGTCGAGTTG GTCAGTGAAG AGATCCTCCG CCAATCACCG
GGGGTCGGCG CCGAGGGCGC GGTCGAACTG GCCAAGAAGG TCCTGGTGGC TGCTGGCATC
ACGTTGAGCG CGCCGAAGCC GAAAAAGAAG GGGGAAGCGC CTGGTCTCGA CGAGTCCGGG
TACCTGCTGT TCCTGGCCCG GCATCAGGTC GAGCGACTCG CCGAACTCGC CATCGGCGCC
GCCGAGGAAA CGACGATCGA CAAGAAGCAG GCCAAGGCCG CCGCTGACTC CAGCCAGAGC
GTGGACGTCG CGCTGTTCGG TCGGATGGTC GCCGACGCCG CCGACCTGAA CGTCGACGCC
GCGGCGCAGG TTGCCCACGC ACTCTCCGTA CATGCCGTCC GCAACGAATT CGACTATTTC
ACCGCCGTTG ACGACCGTAA AGAAAATGAG GAGGAGACCG GGGCCGGCAT GATCGGAACG
GTGGAGTTCA ACTCTTCCAC GCTCTACCGC TACGCGACGG TGAACATCGA CGGGCTGCGG
GTCAACCTCG GTGACGATGC TGCCACGATC CGCGCGGCTC AGGAATTCGT TCGTGCCTTC
GTGACTTCAA TGCCCACCGG AAAGCAAAAC ACTTTCGCCA ATCGCACCCT GCCCGACGCC
GTCGTGGTGC AGGTCCGCGA CTCCCAGCCG ATCAACTTGG TCGGTGCCTT CGAGGAACCC
GTCGAGGTCC CGGCCGGCGG ATCCCGGCTG CGGGAAGCCG CGGACCGGCT CGTCGCTCAC
GCGCAGAGCG TCGACCACGC CTACGGCACC GCGCCCACCC GATCGATGAC AGTGCTGGCG
TCGCCCACCG TCGGGACCCT CGCGGCCCTG GGGGAGTCGA TCGCGCTCGA CGACATGATC
GCAGCGGTGG GGGAGGCGGT CGCCGACGCT TTGGTCGCCT CCGCGGTCCG GGCGTGA
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| Protein sequence | MKCIDIHILQ TVPPSNLNRD DTGSPKTAIY GGVQRARVSS QAWKRATRKA FDGRIKPADL
GVRTKRVVEL VSEEILRQSP GVGAEGAVEL AKKVLVAAGI TLSAPKPKKK GEAPGLDESG
YLLFLARHQV ERLAELAIGA AEETTIDKKQ AKAAADSSQS VDVALFGRMV ADAADLNVDA
AAQVAHALSV HAVRNEFDYF TAVDDRKENE EETGAGMIGT VEFNSSTLYR YATVNIDGLR
VNLGDDAATI RAAQEFVRAF VTSMPTGKQN TFANRTLPDA VVVQVRDSQP INLVGAFEEP
VEVPAGGSRL REAADRLVAH AQSVDHAYGT APTRSMTVLA SPTVGTLAAL GESIALDDMI
AAVGEAVADA LVASAVRA
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