Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3038 |
Symbol | |
ID | 8448651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3334272 |
End bp | 3334736 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645042122 |
Product | thioesterase superfamily protein |
Protein accession | YP_003202364 |
Protein GI | 258653208 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000070991 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00472926 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGACT TCCCCGGCCC CGCCGGCACC CAGGCCCTGG CCGCCCTCGG ACCGTCCGCC GACCCCGACC ACGTGCTGTC CATCCTGCGC GAGATGCGCG GCGAGCTGGC CGAGCGGCTG GGCATCGAGA TCACCGAGTT CACCCGGGAC CGGGTGGTCG CCACCATGCC GGTCGCCGGC AACCGGCAGC CGTTCGGCCT GCTGCACGGC GGGGCCAGCG CCGCCCTGGC CGAGACGATG GGCTCGTTCC ACGGATCGCT GGTCGGGGGC GGCCGCGCCC CGCTGGGCAT CGACCTGAAC TGCACCCACC ACCGCTCGGC CACCGACGGC CTGGTCACCG CGGTGTCCAC GCCGATCCAC GTCGGCCGCA CCATCTGCAC CTTCGACATC GTGATCAGCG ACGAGCAGCA ACGCCGGATC TGCTCCGCCC GGCTGACCGT GATGCTGCGC GACCTGTCCC GCTAG
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Protein sequence | MTDFPGPAGT QALAALGPSA DPDHVLSILR EMRGELAERL GIEITEFTRD RVVATMPVAG NRQPFGLLHG GASAALAETM GSFHGSLVGG GRAPLGIDLN CTHHRSATDG LVTAVSTPIH VGRTICTFDI VISDEQQRRI CSARLTVMLR DLSR
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