| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3034 |
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| Symbol | rpsA |
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| ID | 8448647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3328262 |
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| End bp | 3329719 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645042118 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_003202360 |
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| Protein GI | 258653204 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000095518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00573325 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCATCT CTACCGTCGC CGCCCCACAG GTCGCCATCA ACGACATCGG GTCGGCTGAG
GACTTCCTCG CCGCCATCGA TTCCACGATC AAGTACTTCA ACGATGGCGA CATCGTCGAA
GGCACCATCG TCAAGGTCGA TCGCGATGAG GTCCTGCTCG ACATCGGCTA CAAGACCGAG
GGCGTCATCC CCTCGCGTGA GCTGTCCATC AAGCACGATG TCGACCCCAG CGAGGTCGTC
GAGATCGGCG AGCACGTCGA GGCCCTCGTC CTGCAGAAGG AGGACAAGGA AGGCCGCCTC
ATCCTGTCCA AGAAGCGAGC TCAGTACGAG CGCGCCTGGG GCACGATCGA GAAGATCAAG
GAAGAGGACG GCGTCGTCTC CGGCACCGTC ATCGAGGTCG TCAAGGGCGG CCTGATCCTG
GACATCGGCC TGCGCGGCTT CCTGCCCGCG TCCCTGGTCG AGATGCGCCG TGTCCGCGAC
CTGCAGCCCT ACGTGGGCCG CCAGCTGGAC GCCAAGATCA TCGAGCTGGA CAAGAACCGC
AACAACGTGG TGCTGTCCCG CCGGCAGTGG CTCGAGCAGA CCCAGTCCGA GGTGCGCAGC
GAGTTCCTCA ACCAGCTGGG CAAGGGCCAG GTCCGCAAGG GCGTCGTGTC CTCCATCGTC
AACTTCGGTG CGTTCGTCGA CCTGGGTGGC GTGGACGGCC TGGTGCACGT CTCCGAGCTG
TCCTGGAAGC ACATCGACCA CCCGTCCGAG GTCGTCGAGG TCGGCCAGGA GGTCACCGTC
GAGGTCCTGG ACGTCGACAT GGACCGCGAG CGCGTCTCGC TGTCGCTCAA GGCGACCCAG
GAGGATCCGT GGCGGCACTT CGCCCGGACC CACGCCATCG GCCAGGTCGT CCCCGGCAAG
GTCACCAAGC TGGTTCCGTT CGGCGCGTTC GTGCGCGTCT ACGACGGCAT CGAGGGCCTG
GTGCACATCT CGGAGCTGGC CGGCCGCCAC GTGGAGGTCC CCGAGCAGGT CGTGACCGTC
GACGACGAGA TCTTCGTCCG CGTCATCGAC ATCGACCTGG AGCGTCGTCG GATCTCGCTG
TCGCTCAAGC AGGCCAACGA GGGCATCACC GCCGAGACCG AGTTCGACGA CGTGCGGGCC
CAGTACGGCG TGGTCGACCA CTACGACGAG CAGGGCAACT TCGTGCCGCC GGAGGGCTTC
GACGTCGAGA CCGGCGAGTG GCTCGAGGGC TTCGACACGC AGCGCGAGGC GTGGGAGAAG
CAGTACGCCG ACGCGCACGC GGTGTACGAG TCGCACCTCA AGCAGATCGC GGCCGCCCAG
GTGGCGGACG CGGAGTCGGC CGAGCCGAGC AACTACTCGT CCGACACGGC TGCGGCCGCC
GGCGAGCAGG TCCCGGCCGG TTCGCTGGTC AACGACGAGC AGCTCGCTGC GCTGCGGGAG
CGTCTGGCCG GTAACTGA
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| Protein sequence | MSISTVAAPQ VAINDIGSAE DFLAAIDSTI KYFNDGDIVE GTIVKVDRDE VLLDIGYKTE
GVIPSRELSI KHDVDPSEVV EIGEHVEALV LQKEDKEGRL ILSKKRAQYE RAWGTIEKIK
EEDGVVSGTV IEVVKGGLIL DIGLRGFLPA SLVEMRRVRD LQPYVGRQLD AKIIELDKNR
NNVVLSRRQW LEQTQSEVRS EFLNQLGKGQ VRKGVVSSIV NFGAFVDLGG VDGLVHVSEL
SWKHIDHPSE VVEVGQEVTV EVLDVDMDRE RVSLSLKATQ EDPWRHFART HAIGQVVPGK
VTKLVPFGAF VRVYDGIEGL VHISELAGRH VEVPEQVVTV DDEIFVRVID IDLERRRISL
SLKQANEGIT AETEFDDVRA QYGVVDHYDE QGNFVPPEGF DVETGEWLEG FDTQREAWEK
QYADAHAVYE SHLKQIAAAQ VADAESAEPS NYSSDTAAAA GEQVPAGSLV NDEQLAALRE
RLAGN
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