| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3027 |
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| Symbol | |
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| ID | 8448640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3317036 |
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| End bp | 3320068 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645042111 |
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| Product | ABC transporter related |
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| Protein accession | YP_003202353 |
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| Protein GI | 258653197 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0527794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00388212 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGGCAC GCCTGACCCG GTTGTTGAAC ACCCGAACCC GCAAGATCAC GGCCGTCGCG
GTCGTCGTGC TCCTGGTCGC CGGCATCGCC TGGGTGGCCT GGCCGGCGCC CGCGCCCACC
CCGGTGGCCA GCCGGGACGT CACCATCACC GCGCCGGGCG GACCGGGTGT GGACGAGCCG
GTGAAGCTGG ACGCGACGCT GTACCTGCCG ACGACCACCC CGGCCCCGGC GATCATCATG
GCCCACGGCT TCGGCGGGTC GAAGGACTCG GTGGCCGCCG ACGCCGAGCA GTCCGCCCGG
GACGGGTTCG TGGTGCTGGC CTATTCGGCC CGCGGTTTCG GCGCTTCCAC CGGTCAGATC
GGGCTCGATT CGCTGGACTA CGAGATCCCC GACGCCCGCG CGCTGATCGA CTGGTTGGCC
ACCCAGCCGG AGGTGCAGCT GGACGGACCC GACGACCCCC GGGTCGGGGT CACCGGCGGG
TCCTACGGCG GCGCGCTGTC GCTGATGCTG GCCGGCACCG ACCCCCGGGT CGATGCCGTC
GTCCCGCTGA TCACCTGGAA CGACCTGGAA CAGTCCCTGT TCCCCAACGC GCAGGCCACC
GACGCCGACC TGGCCGCGGG CACCCCGGCC GCCGCCGAAG GGGTCTCCGA CGGGGTGTTC
AAGAAGTTCT GGACCTCCAC CCTGATGGCC TCGGTGACCA CCGGGTCGGC CCTGTCGGCC
ACCGGAACCG CCCAGGGCGA CACCGGCGAC AGCAACTTCG TCCGCCGCGG CACCACCTCG
ACCAGCCCCA GCGCGGCAGC CGATTCGGGG TCATCGACCA CCGGGGTGAG CCCGCAGGCG
GCGGCCGCTG CCCTTTCCGG CAGCTGCGGC CGGATGATGG TGCAGCTGTG CGCCGGCTAC
GCGCAGGCCG CGCAGACCGG CCGCATCGGG CCCGAGTTCT CGGCCTTGCT GGCCCGGTCC
AGCCCGGCGG CGGTGGTCGG CGACATCACC GCGCCGACGC TGCTGGTGCA GGGCGAGAAG
GACACCCTGT TCCCGCTCAG CGAGGCCGAC GCCAACGCCC GGGCGATCGC CGCCAACGGC
GCCACGGTGG CCGTGACCTG GTACAACGGT GGCCACGACG GCGGCACCAG CCCGGACACC
GCGACCCGGG ATCGGATCAC CCAGTGGTTC GACTACTACC TGGCCGGCCG CGGCCCGGCC
CCTTCGCAGG CGTTCCGGTA CACCGTGGAT GGCCCGATCA GCGACACCGG CAGCGCCCGC
AGCCGGACCC TGGAGGTGCC CGAGTATCCG GGGCTGGCGG CCGGCTCGAC CACCAACCGG
GTGTCGATCC CGTTGTCCGG CGACGCCCAG TTCGTGGTCA ACCCGCCCGG GGCGACCCCC
GCGTCGATCT CCAGCCTGCC GGGCATCTCG GGGTTGGCCT CGACCGCGCT GTCCACCTTC
GCCGGCGGCC TGCCCGGGCA GACGGCCCGC TTCGAATCCG CCCCGTTCGA CGTGCTGACC
GTGCTGGCCG GCACCCCGCG GATCAACCTG ACGGTGACCA AGTTGCCGAT CCCCGGCACC
GTCGAGCAGG CCGGCACCCA GACCGACGAG GGCATGGTGC TGTACGGGTC GATCGCCAAG
GTCTCCGCCG GCGGCACCCG GTCCACCGTG GGCGGGGTGG CGCCGATGCG GCTGCCCGAG
GCCGCCAACG GCACGCCCGT CCCGGTCACC CTGAGCCTGC CGGCCGCCGC GTTGCAGATC
GAGGCCGGCT CGACCCTCGA GGTCAGCCTG TCCACCACCG ACCAGGCCTA CGCCGGGCCG
ACCGCGCCGG CCGCCTACCG GGTGGCCCTG AGCACCGACC CGGCCCTGGA CGGGATTACC
GGGGTCAGCG CCCCGGAGGT CGGCGGCGAG CGCGTCTCCG GCCCCGACAT CCCGCTGTTC
CAGCTGATCG GGCTCATCGT GCTGGCCCTG CTGGTGGTGC TCGCGCTGGT CATCGGCGGC
CGGGTGCGCT CCGGCCGGGC CGACGTCGAC CCGTCGCTGG TCGATGTGCC GCTGTCGATC
AAGAACCTGG GCAAGTCCTA CCCGGGCGGG GTCAAGGCCG TCACCGACGT CAGCCTGCAG
GTCAAGGCCG GTCAGGTGCT CGGCCTGCTC GGGCCCAACG GGGCCGGCAA GACGACCACC
CTGCGCATGG TGATGGGCCT GATCACCCCG ACCGAGGGTG AGATCCGGGT CTTCGGGCAC
CTGGTCAAGC CCGGCTCGCC GATCCTTTCC CGGATCGGCA GCTTCGTCGA GGGTTCCGGC
TTCCTGCCGC ACCTGTCCGG CCGGGCCAAC CTGGAGCTGT ACTGGAAGGC CACCGGCCGC
CCGGCCCAGG ACGCCAACCT GGCCGAGGCG ATGGAGATCG CCAACCTGGG CAAGGCGGTG
GACCGCAAGG TCCGCACCTA CTCGCAGGGC ATGCGGCAGC GGCTGGCCAT CGCCCAGGCG
ATGCTCGGAC TGCCCGAGCT GCTGCTGATG GACGAGCCCA CCAACGGGCT CGACCCGCCC
CAGATCCACG CCATGCGCGA GGTGCTGCGC CGGTATGCGG CGACCGGCCG CACCGTGTTG
GTCTCCAGCC ACCTGCTGTC CGAGGTGGAA CAGACCTGCA CCCATGTGGT GGTCGTGCAC
CTGGGACGGA CCATCGCCGC CGGCACGGTC GCCGAACTGG TCGCCACCTC CGGCGAGGTG
GTCTTCGACG TGGACGACCA GGACACCGCC GAGCGGGTGC TGCGCACCCT GGCCACTGAC
ATCGAGCGGA CCGAGGCCGG GGTGCAGGTC GACCTGGGCT CGGTGCCGCC GTCCCAGGCG
GTGTCCGCGC TGGTCGCGGC GGGCGTCGCG GTCAACGGGG CCGCGCCGCG GAACCGGCTC
GAGGACGTGT TCCTGGACAT GGTCGGGGCC TCCGGCGCGG CCGGGTCCTC CTCCGACCAT
CCGGTGACCG GCACCCGGCC CGAGCGGTCG ACGCGGCCGC CGGACCCCGG CCCCCGGACC
CCCGTCGGCA CCCAACAGGG AGGGTCGGCA TGA
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| Protein sequence | MKARLTRLLN TRTRKITAVA VVVLLVAGIA WVAWPAPAPT PVASRDVTIT APGGPGVDEP
VKLDATLYLP TTTPAPAIIM AHGFGGSKDS VAADAEQSAR DGFVVLAYSA RGFGASTGQI
GLDSLDYEIP DARALIDWLA TQPEVQLDGP DDPRVGVTGG SYGGALSLML AGTDPRVDAV
VPLITWNDLE QSLFPNAQAT DADLAAGTPA AAEGVSDGVF KKFWTSTLMA SVTTGSALSA
TGTAQGDTGD SNFVRRGTTS TSPSAAADSG SSTTGVSPQA AAAALSGSCG RMMVQLCAGY
AQAAQTGRIG PEFSALLARS SPAAVVGDIT APTLLVQGEK DTLFPLSEAD ANARAIAANG
ATVAVTWYNG GHDGGTSPDT ATRDRITQWF DYYLAGRGPA PSQAFRYTVD GPISDTGSAR
SRTLEVPEYP GLAAGSTTNR VSIPLSGDAQ FVVNPPGATP ASISSLPGIS GLASTALSTF
AGGLPGQTAR FESAPFDVLT VLAGTPRINL TVTKLPIPGT VEQAGTQTDE GMVLYGSIAK
VSAGGTRSTV GGVAPMRLPE AANGTPVPVT LSLPAAALQI EAGSTLEVSL STTDQAYAGP
TAPAAYRVAL STDPALDGIT GVSAPEVGGE RVSGPDIPLF QLIGLIVLAL LVVLALVIGG
RVRSGRADVD PSLVDVPLSI KNLGKSYPGG VKAVTDVSLQ VKAGQVLGLL GPNGAGKTTT
LRMVMGLITP TEGEIRVFGH LVKPGSPILS RIGSFVEGSG FLPHLSGRAN LELYWKATGR
PAQDANLAEA MEIANLGKAV DRKVRTYSQG MRQRLAIAQA MLGLPELLLM DEPTNGLDPP
QIHAMREVLR RYAATGRTVL VSSHLLSEVE QTCTHVVVVH LGRTIAAGTV AELVATSGEV
VFDVDDQDTA ERVLRTLATD IERTEAGVQV DLGSVPPSQA VSALVAAGVA VNGAAPRNRL
EDVFLDMVGA SGAAGSSSDH PVTGTRPERS TRPPDPGPRT PVGTQQGGSA
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