Gene Namu_3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3026 
Symbol 
ID8448639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3315275 
End bp3316933 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content73% 
IMG OID645042110 
ProductNa+/H+ antiporter 
Protein accessionYP_003202352 
Protein GI258653196 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.132443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000850582 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGCAG TCGAGCCGTT GATCTTCCTG GTGATCGGGG TCGTCGCGGT CAACGGCATC 
GCCGGCCGGA TCGGGGTGCC CGCGCCGATC CTGCTGCTGG TGGCCGGGGT CGGGGTGTCG
TTCATCCCCG GGGTGCCCGA GGTGCAGGTG GAGCCCGAGG TCGTGCTCAC CGTGCTGATT
CCGCCGCTGC TGTTCGCCGC GGCCACCGAG GCCTCGGTGG TGGCGCTGCG CGGCCTGCTG
CGCTCGATCA CCCAACTGGC CGTCGGCATG GTGCTGGTGA CGGCGTTCGC CGTCGCCGCG
GTGGCCTACC TGCTCATCCC GGGCATCCCG TTCGCGGCCG CCCTGGCCCT GGGCGCGATC
GTCGCGCCGC CGGACGCGGT GGCGGCGATC GCGGTGGCCC GCCGGGCCGG GCTGCCCCGC
CGGGTGGTCA CCGTGCTGGA GGGCGAGTCG CTGTTCAACG ACGCGACCTC CCTGGTCCTG
CTCCGGGTGG CCCTGGTCGG GCTGGCTGTC GGCACCATGT CCTGGGGCGA GGCCGTGCTG
GAGTTCGCCT GGGCGACGGC GGGCGGGATC CTGGTCGGCG GCGTCGTCGG CGTCGTGCTG
TCCTGGGCCC GCCGGCACAC CGGTTCCACG CTGGCCACCA CCGCGCTGTC GCTGGTCGCT
CCGTTCGTCG CCGATCAGCT GGGCGAGGCC GCGCAGGCTT CCGGCATCCT GGCCGTCGTG
GTGGCCGGTC TGGTGCTCGG CTACCGGGCC CCCTACGACC TCAAGCCCCA GGTCCGGCTG
ACCCTGACGG CGACCTGGAG CACCGTGCAG TACGTGCTCG AGGGCACCGT GTTCGCGCTG
ATCGGGCTGC AGCTGTGGGC CATCGTGACC GCCCCCGACA TCGGCCGCCG GCCGGTCGTG
CTGATCTCCG GGGCGATCCT GCTGACGGTC ATCCTGATCC GGCCGGTCTG GATCTTCCTG
CTCAACTGGG CCGGCCGGCT GCTGCGCCGG CCGGGCTCGT TCGACGACTG GCGCCCGCTG
GCCGCGGTGT CCTGGGCCGG CATGCGCGGG GTCGTGTCCC TGGCCGCCGC GCAGACGCTG
CCGCTGGACA CGCCCTACCG GTCGCTGCTG CTGACCTGCA CCATCGCGGT CATCCTGGGC
ACCCTGGTGG TCCAGGGGCT GACCCTGCCG ACGGTCATCA AGTGGCTGCA CTTCCCCGGC
GATCCGGCCG CCGAGATCGA CGCCGAGCGG ATGGCCGCCC GGGACGAGGC CAATCGCGCC
ATCGCCGCCG CGGTGGAGCG GGAGATCGCC GAGAACGATG TTCCCGCCGA CCGGGCCCGC
CGGATGCGGC TGTGGGTGGA GACCCGGGAC TGGCGGACGC TGGCCGAGGA TCCGCGTTCG
GCCTCGGACA CCGGCCGCAG CCGGCTGCAC CGGTTGGCCG ACTGGAACCG GGACATGATG
AACATCGAAC GCGACGTGTT CGTCGGCCTG CGCAATTCCG GGCGCATCTC CGAGGAGGTC
ATGCGGGAGA TCGAGTACGG GCTGGACCTG GAGGAGGCCC TGCTCGACCA GCGGTTGGAC
GTGGCCACCG GCCATCTGGA CCAGCTGCGC AGCACTCGGG ACGACCCGGC CGACGATCCG
CCCGGCAGCC CGCCGGACCG GGCGACCGGA CCGGCCTGA
 
Protein sequence
MPAVEPLIFL VIGVVAVNGI AGRIGVPAPI LLLVAGVGVS FIPGVPEVQV EPEVVLTVLI 
PPLLFAAATE ASVVALRGLL RSITQLAVGM VLVTAFAVAA VAYLLIPGIP FAAALALGAI
VAPPDAVAAI AVARRAGLPR RVVTVLEGES LFNDATSLVL LRVALVGLAV GTMSWGEAVL
EFAWATAGGI LVGGVVGVVL SWARRHTGST LATTALSLVA PFVADQLGEA AQASGILAVV
VAGLVLGYRA PYDLKPQVRL TLTATWSTVQ YVLEGTVFAL IGLQLWAIVT APDIGRRPVV
LISGAILLTV ILIRPVWIFL LNWAGRLLRR PGSFDDWRPL AAVSWAGMRG VVSLAAAQTL
PLDTPYRSLL LTCTIAVILG TLVVQGLTLP TVIKWLHFPG DPAAEIDAER MAARDEANRA
IAAAVEREIA ENDVPADRAR RMRLWVETRD WRTLAEDPRS ASDTGRSRLH RLADWNRDMM
NIERDVFVGL RNSGRISEEV MREIEYGLDL EEALLDQRLD VATGHLDQLR STRDDPADDP
PGSPPDRATG PA