| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3009 |
|---|
| Symbol | |
|---|
| ID | 8448622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3298553 |
|---|
| End bp | 3299116 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645042093 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202335 |
|---|
| Protein GI | 258653179 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000209672 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000132529 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGCC TGCCGACCGC CGCCGTGATC GTGCTCGCCG TCGCCGGCAC TGTGGCCATC
ATGTGGGCGG TGGCCGTGGC GTCCTCGACC ACGCTGCTGG AGACCGTCGC CCAGCTCGGA
CCGGTGGCCA CCGCGCTGAC CGCGATCGTC GCGCTGATCG TCGGCATCGG CACCATCCGG
CAGCGGCAGC AGGCCGATGC CCTGGACGCG CAGGCGCAGC GGCGGGATCA GTGGTGGCAG
CGCGCGCAGT GGGCGATCGA CCGGCTCTAC GAGCCGCCCG AGGACCGTCA GCTGGTGTCC
TGGCGGATCC TGGGCACGCT GGCGGAGTCC GAGCTGGCCG GGCCGGAGGA ACTGGCGATC
CTGCGGGCGG TGGCCGTGCG CCGGTTGCGC CCGGACGATC CGGCGCGCCC GTCCGCGCAG
CTGACCGAAC CGAGCGGGCC GGTCGCGCCG TCGGCCGTCG ATGCGGCCGC GGCCCAGCTG
TGGACGGCCG CCGAACGGCG ATTGGGCGGC ACCGCGCCGG AATGGGTGCG CCGGCTCACG
CCGGGACCGT CCCCAACCGG GTAG
|
|---|
| Protein sequence | MRRLPTAAVI VLAVAGTVAI MWAVAVASST TLLETVAQLG PVATALTAIV ALIVGIGTIR
QRQQADALDA QAQRRDQWWQ RAQWAIDRLY EPPEDRQLVS WRILGTLAES ELAGPEELAI
LRAVAVRRLR PDDPARPSAQ LTEPSGPVAP SAVDAAAAQL WTAAERRLGG TAPEWVRRLT
PGPSPTG
|
|---|
| |