| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2996 |
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| Symbol | |
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| ID | 8448609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3287143 |
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| End bp | 3288579 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645042080 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003202322 |
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| Protein GI | 258653166 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.015101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000683759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATCGAT CTCGACTGAC GTTGCTGGCG GTCTCGCTGG CCACGTTCAT GAGCTATCTG
GACAACAACA TCGTCAACGT CGCCATCCCG GCGATCGAGC GTGACCTGCA CCTGACGACC
TCGGGGATGG AGTGGATCGT CAGCTCGTAC ATCCTGGTCT TCGCCGGGTT GCTGCTGGCC
GGGGGCCGGC TGGCCGACGT CTGGGGCCGC AAGCGGGTGT TCCTGATCGG CCTGTCGATC
TTCACCGTGG CCTCGCTGGC CGCCGGGCTG GCCGGCTCGG TCGACGTGCT GGTCGGCGCC
CGCACCGTCC AGGGACTGGG CGCCGCCCTG CTGACGCCGA CCACCCTGGC GATCATCTCC
GCCACGTTCG CCGAAGGTCG GCCGCGGGCC GCCGCGGTCG GGTTGTGGAG CGCCGTCGGC
GCCCTGGCGC TGGCCGTCGG TCCGCTCCTG GGCGGGGTGC TCTCGGAGTA CCTGAGCTGG
GGCTGGATCT TCCTGGTCAA CGTGCCGGTC GGCGTGGTGA CCCTGGTGCT CGGCGCCACC
GTCATCGCCG AGTCGCGGGA TGCGACCTCG CCGCGACGCT TCGACGTGCC CGGCATGCTG
ACGTCCTCGG CCGCCCTGTT CGCACTGACC TTCGCGCTGA TCGAAGGCCA CGACCGCGGC
TGGACCTCGC CGATGATCCT GGGCTGCTTC GCGGTGGCCG CCGCCCTCGG GGTGGCGTTC
GTGCTGGTGG AGCGCCGCTC CACCGAGCCG ATGGTGGCGA TGTCGCTGTT CCGCGAGCGG
GTGTTCACCG GGGGCATCGT GGCCCTGATG ATGTGGGCCT TCGGCCTGTT CGGCATCTAC
TTCTTCACCT CCCTGTACCT GCAGGGGGTG CTGGGTTTCA GCCCGACCGA GGCCGGCGCC
GCGTTCGTGC CGATGGCCCT GCTGATGGCC GCGGGAGCCG TGATCTCCGA ACGGGTCTCG
CACCGGATCG GCGCGGGTCG GGTGGTCCCG GTGGCCATGC TGATGATGGC CGCGGGCATC
GCCTCGGTCA GCCTGCTCGG TGCGGACGCC GGATTCTGGT CGTTGATGCC GGCCTTCGCG
GTGATCGGGA TCGGCGGCGG GCTGACCGTC CCGCTGACCG CCAGCGTGCT CGACGCGATG
CCCCGCGGCG AGGCGGGCGT GGCCTCCGGG ATCTTCAACG CCAGCCGCGA GGTCGCCGGG
CTGCTCGGCA TCACGGTGAT CGGGGCCGTG CTGACCGCGC GGCAGGCCAC CCTGCTGGCG
GCCGGGCAGG CGCCGGTCGA CGCGTTCCTG GGCGGCTACC GGACCGGTCT GTTCCTGGCC
GCCGCGCTGG TCGCGGCCGG TGCCGTGGCC GCGTTCGTCG GGTTGCGGGC GACCGCCCGC
CGGGCCGGCG CCCGGCCGGT GGAGTTGCCG ACCGAACCGG CCGTCCTCGC CGGGTGA
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| Protein sequence | MNRSRLTLLA VSLATFMSYL DNNIVNVAIP AIERDLHLTT SGMEWIVSSY ILVFAGLLLA
GGRLADVWGR KRVFLIGLSI FTVASLAAGL AGSVDVLVGA RTVQGLGAAL LTPTTLAIIS
ATFAEGRPRA AAVGLWSAVG ALALAVGPLL GGVLSEYLSW GWIFLVNVPV GVVTLVLGAT
VIAESRDATS PRRFDVPGML TSSAALFALT FALIEGHDRG WTSPMILGCF AVAAALGVAF
VLVERRSTEP MVAMSLFRER VFTGGIVALM MWAFGLFGIY FFTSLYLQGV LGFSPTEAGA
AFVPMALLMA AGAVISERVS HRIGAGRVVP VAMLMMAAGI ASVSLLGADA GFWSLMPAFA
VIGIGGGLTV PLTASVLDAM PRGEAGVASG IFNASREVAG LLGITVIGAV LTARQATLLA
AGQAPVDAFL GGYRTGLFLA AALVAAGAVA AFVGLRATAR RAGARPVELP TEPAVLAG
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