Gene Namu_2981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2981 
Symbol 
ID8448594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3267879 
End bp3269501 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content73% 
IMG OID645042065 
Productalpha amylase catalytic region 
Protein accessionYP_003202307 
Protein GI258653151 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000947876 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0148383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA ACAGCCAGCC CGTGCCCGTC ACCGCCGCCG AGCCGTCGTG GTGGCGGTCG 
GCCGTGATCT ATCAGATCTA CCCGCGCAGC TTCGCCGACG GCAACGGTGA CGGCATCGGC
GACCTGGCCG GCATCCGATC CCGGCTGCCG TACCTGGTCG ACCTGGGGGT CGACGCGATC
TGGATCAGCC CGTTCTATCC CTCGCCGCAG GCCGACGCCG GGTACGACGT CGCCGACTAC
CGCGACATCG ACCCGGTCTT CGGCACCCTG CCGGAGTTCT CCGACCTGGT CGCCGAATGT
CACCGCGCGA ACGTGCGGGT GATCGTCGAT CTGGTGCCCA ACCACACCTC GGACCAGCAC
GCCTGGTTCC AGGCCGCGCT GGCCGCCGGC CCGGGCAGCC CGGAGCGCGC TCGGTACCTG
TTCCGGGAGG GTCGCGGCGC CAACGGCGAG CTGCCGCCCA ACAACTGGGT GTCCAACTTC
GGCGGCCCGG CCTGGACCCG GGTGCCGGAC GGGCAGTGGT ACCTGCACCT GTTCGCCCCG
CAGCAGCCCG ACCTGGACTG GACCAACCCG GAGGTCGTGG CCGAGTTCCA CGACATCCTG
CGCTTCTGGA TGAAGCTGGG CGTCGACGGC TTCCGCATCG ACGTCGCGCA CGGGCTGGCC
AAGGACGCCG ACCTGGCCGA CCTGCCGGGC GGGGCCGAGG GGCACCTGCT GACCCCGGCC
AACACCAACG ACCACCCGCA CTGGGACCGC GACGAGATCC ATGAGGTCTA CCGCGGCTGG
CGCGCGGTCG TCGACGAGTT CGGCGGGGAC CGGGTGTTCT GCGCCGAGGC GTACGTGCCC
AACCCGCAGC GCTTCGCCGA CTACGTGCGG CCCGACGAGC TGCACACCGC CTTCAACTTC
GACTTCCTGC AGGCCACCTG GGACGCCGCC GACTACCGCC GGGTCATCGA CGAGACGATG
GCCAACCTGC GGGCGGTCGG CGCGCCGGCC ACCTGGGTGC TGTCCAACCA CGACGTGGTC
CGGCACCCGA CCCGCTTCGG CGGCGGCCAG CTCGGCCTGG ACCGGGCCCG CGCCGGCACC
CTGCTGATGT TCGCCCTGCC CGGCGGGGCC TACGTCTACC AGGGCGAGGA GCTCGGCCTG
CCCGAGGTTC TGGATATCCC CGCGCAGTGG CGCCAGGACC CGATCTTCTT CCGCTCCGGC
GGGGAGCGGC TGGGCCGCGA CGGCTGCCGG GTGCCGCTGC CCTGGTCGGA CACGCAGGCG
CCGTACGGGT TCGGCCCGGC CGGCACCCCA TGGCTGCCGC AGCGGCCGGT CTTCGGCGAG
CTGTCCGTGC AGGCCCAGAC CGGCGACCCG GCGTCGACCC TGGAGTTCTA CCGGCGGGCC
CTGCGCATCC GCCGCGAGCG GCCTGAGCTC GGCGACGGTC CCATGCAGTG GCTGGACGCC
CCCGACGGCA TGCTCGTGCT GGCCCGCGGC CAGTTCCGGT GCGCGATCAA CTTCACCGAC
GAGCCGCTGC CGCTGCCGCC GTCCTGCGCC GGCGCGACCC TGCTGCTGAG CAGTTCGGCG
ACCGCCGATC AGGGGTTGGC AGAGCTCGGC GGCAACACCG CCGCGTGGTT CCTGGCCGGC
TGA
 
Protein sequence
MSANSQPVPV TAAEPSWWRS AVIYQIYPRS FADGNGDGIG DLAGIRSRLP YLVDLGVDAI 
WISPFYPSPQ ADAGYDVADY RDIDPVFGTL PEFSDLVAEC HRANVRVIVD LVPNHTSDQH
AWFQAALAAG PGSPERARYL FREGRGANGE LPPNNWVSNF GGPAWTRVPD GQWYLHLFAP
QQPDLDWTNP EVVAEFHDIL RFWMKLGVDG FRIDVAHGLA KDADLADLPG GAEGHLLTPA
NTNDHPHWDR DEIHEVYRGW RAVVDEFGGD RVFCAEAYVP NPQRFADYVR PDELHTAFNF
DFLQATWDAA DYRRVIDETM ANLRAVGAPA TWVLSNHDVV RHPTRFGGGQ LGLDRARAGT
LLMFALPGGA YVYQGEELGL PEVLDIPAQW RQDPIFFRSG GERLGRDGCR VPLPWSDTQA
PYGFGPAGTP WLPQRPVFGE LSVQAQTGDP ASTLEFYRRA LRIRRERPEL GDGPMQWLDA
PDGMLVLARG QFRCAINFTD EPLPLPPSCA GATLLLSSSA TADQGLAELG GNTAAWFLAG