| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2960 |
|---|
| Symbol | |
|---|
| ID | 8448573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3244174 |
|---|
| End bp | 3245532 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645042045 |
|---|
| Product | protein of unknown function DUF245 domain protein |
|---|
| Protein accession | YP_003202287 |
|---|
| Protein GI | 258653131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000286754 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00476046 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTC GGATCATGGG CATCGAGACC GAGTTCGGCA TCACCTGTAC CTTCCACGGG
CAACGCCGGT TGAGCCCGGA CGAGGTGGCC AGATACCTGT TCCGGCGGGT GGTGTCGTGG
GGCCGCTCGT CCAACGTGTT CCTGCGCAAC GGCTCACGGC TGTACCTGGA CGTGGGCTCG
CACCCGGAGT ACGCGACCGC CGAATGCGAC GAGCTGCCGG TGCTGATCGC GCACGACAAG
GCCGGCGAAC GGATCCTGCA GGACCTGGTC GTCGACGCCG AGACCCGGCT GGCCGAAGAG
GGCATCGGCG GGGACATCTA CCTGTTCAAG AACAACACCG ACTCGGCCGG CAACTCCTAC
GGCTGCCACG AGAACTTCCT GATCGCCCGG GGCGGCGAGT TCGCCAAGAT CGCCGACGGG
CTCATCCCGT TCCTGGTCAC CCGGCAGCTG ATCGCCGGCG CCGGCAAGGT GCTGCAGTCG
CCGCGCGGTG CCTCGTACTG CCTGTCCCAG CGGGCCGACC ACATCTGGGA GGGCGTCTCC
TCGGCGACCA CCCGGTCCCG GCCCATCATC AATACCCGCG ACGAGCCGCA CGCCGACGCC
GAGCGGTACC GGCGGCTGCA CGTGATCGTG GGCGACTCCA ACATGAGCGA GACGACCACC
CTGCTGAAGG TCGGCACCGC CGCGCTGGTG CTGGAGATGA TCGAGTCCGG CGTGCCGATG
CGCGACTTCA CCTTCGAGAA CCCCATCCGG GCCATCCGGG AGATCTCCCA CGACACCACC
GGCCGCAAGG CCGTCCGGCT GGCCGGCGGC GGCGACATCA GCGCCCTGGA CGCGCAGACC
GAGTACTACG AGAAGGCGGC CGCGTTCGTC GCCAACCGGG GCACCGACCC GGTCACCCAC
CAGGTGCTGG ACCTGTGGCG GCGCACCCTG GAGGCGGTGC AGACCCAGGA CTTCACCAAG
GTCGACACCG AGATCGACTG GATCATCAAG AAGAAGCTGA TCGATGCCTA CGCGGCCAAG
CACGGCCTGG ACCTGACCCA TCCCCGGATC GCCCAGCTCG ACCTGACCTA TCACGACGTG
CGCCCCGGCC GGGGCCTGCA CTCCCTGCTG GCCGCCCGCG GCCGGGCCGC GCGGGTCGTC
ACCGACGGGC AGATCACGAC CGCGATGACG GTGCCGCCGC AGACCACCCG CGCCCGGCTG
CGGGGCGAGT TCGTCGCCGC CGCCCAGGAC GCCGGCCGCG ACTACACCGT CGACTGGGTC
CACCTCAAGC TCAACGACCA GGCCCAGCGG ACGGTCCTGC TCAAGGACCC GTTCCGGTCC
ACCGACGACC GCGTCACCAA GCTGATCGAG GCCATGTAG
|
|---|
| Protein sequence | MQRRIMGIET EFGITCTFHG QRRLSPDEVA RYLFRRVVSW GRSSNVFLRN GSRLYLDVGS
HPEYATAECD ELPVLIAHDK AGERILQDLV VDAETRLAEE GIGGDIYLFK NNTDSAGNSY
GCHENFLIAR GGEFAKIADG LIPFLVTRQL IAGAGKVLQS PRGASYCLSQ RADHIWEGVS
SATTRSRPII NTRDEPHADA ERYRRLHVIV GDSNMSETTT LLKVGTAALV LEMIESGVPM
RDFTFENPIR AIREISHDTT GRKAVRLAGG GDISALDAQT EYYEKAAAFV ANRGTDPVTH
QVLDLWRRTL EAVQTQDFTK VDTEIDWIIK KKLIDAYAAK HGLDLTHPRI AQLDLTYHDV
RPGRGLHSLL AARGRAARVV TDGQITTAMT VPPQTTRARL RGEFVAAAQD AGRDYTVDWV
HLKLNDQAQR TVLLKDPFRS TDDRVTKLIE AM
|
|---|
| |