| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2952 |
|---|
| Symbol | |
|---|
| ID | 8448565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3233931 |
|---|
| End bp | 3234935 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645042037 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202279 |
|---|
| Protein GI | 258653123 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000079303 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000181549 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCC CCCAGGGCGG TCAATCGGGC AATCAGCCGG GCAATCAGTC GGGCAATCAG
TCCGGCGGCG GCCAGGACGG TTCTTCGTGG TCGGGGCAGC AGCCCGCATC CGACCAGCCC
GCCGACGCGG ACGCCACCAC CGTCTACCGG CCCGGTGACT ACGGGGTCGG CGGGTCATCG
GGCGGCTCCG GTTCGTCCGG CGCCAGCACC CCACCGTCGG GCGGTTCCGC TGACCCGGGC
GCCGGATCCC CGTACTCGTC GGGATCATCG GGCCCGTCGA CCGGTCCGTC GTACGCGCAG
CCGACCAGCG TGCAGCCCGG GTACGGCCAG CAGGCCCCCT ACGGCGGTCA GTCCGGCTAC
GACCAGGGTT CCTACGGTCA GCCCGGCGGC CAGCAGGGGT ACTACCAGCA GCCCGGCTAC
GGCCAGTCGG ACCCGAACGC CGGTCAGGGC TACTACCAGC AGCCCGGCTA CGGCCAGTCG
GACCCGAACG CCGGTCAGGG CTACTACCAG CAGCCCGGCT ACGGCCAGTC CGATCCGAAC
GCCGGTCAGG GTTACGGCCA GTCCTACGGC CAGCAGCCCG GTTACGGCCA GCCACCCGGC
TACGCCCAGC AGCCCGGGTA CGGCGGCTAC ACGGGCACCC CTTCCGGCGG CTTCCCCGCC
ACCGAGGCGC CCAAAAAGTC CAACCAGGGC CTGATCATCG CGATCATCGT GGTGGTCGTG
ATCGCCGCGC TGGCCGCCGT CGCCCTGTTC CTGTGGCCGG GATTCTTGAA CAAGAAGGTC
TTCGACGAGA AGCAGGTCGC GCAGGGCGTC ACCAGCGTGC TGACCGGCAA CCCGCCCTCG
GGCTACGGGC TGACCGGCGT CACCGACGTG ACCTGCCCGT CGGGCCAGCC GGTGCAGGCC
GGGACCAGCT TCCAGTGCGA CCTCAAGGTC GACGGGAAGT CCACCAAGGT CACCGTCAAC
GTGCAGGACA ACAACGGCCT GTACCAGGTG AACCCGCCCA GCTGA
|
|---|
| Protein sequence | MSTPQGGQSG NQPGNQSGNQ SGGGQDGSSW SGQQPASDQP ADADATTVYR PGDYGVGGSS
GGSGSSGAST PPSGGSADPG AGSPYSSGSS GPSTGPSYAQ PTSVQPGYGQ QAPYGGQSGY
DQGSYGQPGG QQGYYQQPGY GQSDPNAGQG YYQQPGYGQS DPNAGQGYYQ QPGYGQSDPN
AGQGYGQSYG QQPGYGQPPG YAQQPGYGGY TGTPSGGFPA TEAPKKSNQG LIIAIIVVVV
IAALAAVALF LWPGFLNKKV FDEKQVAQGV TSVLTGNPPS GYGLTGVTDV TCPSGQPVQA
GTSFQCDLKV DGKSTKVTVN VQDNNGLYQV NPPS
|
|---|
| |